Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1018 ATGGGTGGACAATGTCAATGTGAATATGGTGACATAAGCCTTATCCTGAAGGAAAGTACTCTTGTTTTATTCTTTGCAAGAGGAAATGACAAAATTAAGATACTTAAGTATAATAACAAAGTAAATTCAGAAGATGCAGGAATCAGGACGGAAAGAGGCATCTCAGCCAGCGTCATATGGGTAGAAAGAAATAACTGTTGGGTGAAAGAGGGGCAAATTAGTCAATTAGAAATCGATAGAGCAAGGGACAATAATGAAATGGCTGAGCTAAGAAGCTCAGAAACAGAGACTTGCATTCACTGGTCATCGTCGTCGTCGTCATCTTCACCCACAGAACACAAGAAGGCGAAGCAAGCAAGAGATAGCAGCAGCAGCAAACACCCGGTTTACAGAGGAGTCCGAATGCGGAGCTGGGGCAAGTGGGTATCCGAAATCCGCGAGCCCCGCAAGAAGAACCGGATCTGGCTCGGCACGTTTGCCACCCCCGAGATGGCGGCGCGTGCCCACGACGTCGCCGCACTCGCCATTAAAGGCAACTCCGCCATTCTCAACTTCCCCGAACTAGCGGGTTCGCTACCCCGACCTGCTTCCAACTCGCCCCGAGACGTTCAGGCCGCCGCTTCTAAGGCCGCTTCCATGGAGGTATTAAACCCCCCAACGACGTCGCATTCGTCTTCCCCTTCGTCGTCGTCGTTGACGCAGTCCTCGTCGTCCTCGTCATTGGCGATATCCTCCTCCTACAGCGACGGCGACCCCTCCACCCCGGAAGAACTTGGTGAGATAGTGGAGCTTCCGCGTTTGGGAACCAGTTTCGACTCGCCCGACCCGAGAAATGAGTTCGTGTTTTTTGACCCGGTAGATGGGTGGCTGTACCCTCCCCCTCCCCTGTGGTATCAGAGCATTTATGATGACAGGGAATTTGGTGGGTACATGCTTGGGGATCACACTTCAATGCAAGAAGAAGCTGAGACTATGGTTCTGTGTGGATTTGAGGGTTCGTTGTGGCAACATTAA 1014 0.5138 MGGQCQCEYGDISLILKESTLVLFFARGNDKIKILKYNNKVNSEDAGIRTERGISASVIWVERNNCWVKEGQISQLEIDRARDNNEMAELRSSETETCIHWSSSSSSSSPTEHKKAKQARDSSSSKHPVYRGVRMRSWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAGSLPRPASNSPRDVQAAASKAASMEVLNPPTTSHSSSPSSSSLTQSSSSSSLAISSSYSDGDPSTPEELGEIVELPRLGTSFDSPDPRNEFVFFDPVDGWLYPPPPLWYQSIYDDREFGGYMLGDHTSMQEEAETMVLCGFEGSLWQH 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1018 337 Coils Coil 73 93 - -
Bisa03g1018 337 Gene3D AP2/ERF domain 129 187 IPR036955 GO:0003700|GO:0006355
Bisa03g1018 337 Pfam AP2 domain 128 178 IPR001471 GO:0003700|GO:0006355
Bisa03g1018 337 CDD AP2 130 188 IPR001471 GO:0003700|GO:0006355
Bisa03g1018 337 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Bisa03g1018 337 MobiDBLite consensus disorder prediction 99 129 - -
Bisa03g1018 337 SUPERFAMILY DNA-binding domain 129 187 IPR016177 GO:0003677
Bisa03g1018 337 FunFam Ethylene-responsive transcription factor 2 128 187 - -
Bisa03g1018 337 MobiDBLite consensus disorder prediction 216 257 - -
Bisa03g1018 337 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Bisa03g1018 337 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Bisa03g1018 337 MobiDBLite consensus disorder prediction 216 252 - -
Bisa03g1018 337 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 106 270 - -
Bisa03g1018 337 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1018 Bisa-ChrBisa03 13794672 13796428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1018 102 308 AP2-EREBP Transcription Factor Family AT5G11590 60.766 1.10e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g1018 AP2 8.1e-14 CL0081