Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1001 ATGGATAGCGTACTAGTTGCAGAAGGCACCGACGACATCCAGCCGGCCACGACGTCGCATCGGATGGATTTGGAGGGTTTCGACCTGGACGAGGCGCTGGCGGCAGCGGAGGAATCGCGCCGGCGATTCGCAGCTTCGAAGACATTTGTGTCGAAGTTGCCGGCGGTTGAAGAGACGGGGAGCGACGCCGTTTGCTGGGTATGCATGGAAGGGTTTGACCAACACAAGAGCTGTGACTCGGAGGGAAACAAACGAATACCGTGTGGCCACGTGTACCATGGAAGCTGCATCGCCGTCTGGATCTCTTTCTCCAACTCTTGCCCCCTGTGCCGCTCCTATCTAATAAATTAG 351 0.5698 MDSVLVAEGTDDIQPATTSHRMDLEGFDLDEALAAAEESRRRFAASKTFVSKLPAVEETGSDAVCWVCMEGFDQHKSCDSEGNKRIPCGHVYHGSCIAVWISFSNSCPLCRSYLIN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1001 116 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 43 111 - -
Bisa03g1001 116 SUPERFAMILY RING/U-box 58 114 - -
Bisa03g1001 116 ProSiteProfiles Zinc finger RING-type profile. 65 111 IPR001841 -
Bisa03g1001 116 Pfam Ring finger domain 65 111 IPR001841 -
Bisa03g1001 116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 115 IPR013083 -
Bisa03g1001 116 SMART ring_2 65 110 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1001 4 111 C3H Transcription Factor Family AT1G26800 31.481 6.73e-13 60.5