Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0997 ATGTGTTCCTTAGGAAAGGAAGTGTCAGATCAGAAGGGAGAGATGAGAGGAAAAGAGAGAGGTGGGAACTCTATAGCCATAATTTTCAAATATGCTGACTGGATTGATGTGGTGCTGATGGTAATGGGGGCTTTGGGAGCAATAGGAGATGGCATGTCCACAAACGTATTGCTTGTATTTGTAAGTCGTATCATGAACAGCTTGGGATATGGGAATAACCAGCAAAACAGTGGGAATTTCATGGCTGAGGTTGAAAAGTGCAGTTTATATTTTGTCTACTTGGGATTAGCGGCCATGGTGGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACGAGCGAGAGGCAGGTGCTGAGAATTCGTTATAAGTATTTAGAAGCTGTGCTGAGACAAGAAGTGGGGTTCTTCGATTCCCAAGAAGCAACAACTTCAGAAATCATCAACAGCATATCAAAGGACACTTCTCTCATCCAAGAGGTTCTAAGCGAAAAGGTACCCCTATTCTTTATGCACTCATCATCGTTTGTCTCAGGGGTTGCATTCTCTGCGTACTTCAGTTGGAGGTTGGCCTTGGTAGCATTTCCAACCCTGCTTGTGCTCATTATTCCGGGAATGCTATATGGAAAGTACCTTATCTATTTGTCAAAGAAGTGTTACAAGGAGTATGGCAAAGCAAACGCCATTGTAGAACAGGCTCTAAGCTCTATCAAGACTGTATATTCCTTCACTGCGGAGAAGAGAATCACTGAGAGGTATTCAGATATACTGGATGCAACTTCAAGGCTAGGAGTGAAGCAGGGCATAGCCAAGGGTCTGGCTGTAGGAAGCATGGGTCTTTCGTTTGCAATATGGGCTTTTCTTGCTTGGTATGGAAGCCATTTGGTTATGTTCAAAGGTGAAAGTGGAGGAAGGATCTATGCAGCAAGTGTTACCTTCATAATGAGTGGACTATCCCTTGGAGTGGCGCTTCCTGACCTGAAGTACTTCACAGAAGCATCTGTTGCAGCTTCACGCATATTTGACATGATTGAGAGGATACCATCAATTGATGGTGAAGACACAAAAGGACTAGTGTTAGAAAGCATGAGTGGCAAGATAGAATTTGAGCACGTCAAATTCACATACCCTTCTCGTCCAGAAGCTATGGTACTAAAGGATTTCAACCTCACCGTTGAAGCAGGGAAAACTGTTGCTTTAGTTGGTGCGAGTGGAAGTGGTAAATCCACTGCAATAGCATTACTGCAGAGATTTCATGATGCAGATGAAGGCACTGTGAGGATTGATGGTGAAGACATAAGATGCCTACAGTTGAAATGTATAAGAGGGAAAATGGGGCTTGTGAGTCAAGAGCATGCACTGTTTGGGACATCTATAAAGGAGAATATCATGTTTGGGAAGCCTGATGCTACAATGGATGAAGTAGTTGCTGCAGCCACTGCTGCTAATGCTCATAACTTCATAAGGCAGCTTCCTGAAGGTTATGAGACCAAGGTTGGAGAAAGGGGGGCACTTCTATCTGGTGGACAAAAGCAGAGAATAGCCATTGCAAGAGCTATCATAAAGAACCCTGTAATTCTTCTACTTGACGAAGCAACTAGTGCTCTTGACTCTGAATCGGAATCACTGGTTCAGAATGCCCTTGATCAGGCCTCTATGGGAAGAACCACACTGGTTGTTGCCCACAAGCTATCAACTATTCGAAATGCAGATGTCATAGCATTGGTCAATGGTGGTTGCGTCATTGAAACAGGTACCCACAACGAACTCATCAACCGCCCAAATGGGTACTACGCAAAACTAGCAAAATTACAGACACAACTCAGTTGTGATGACCAAGAACAAAATCCAGAGATCAGTATATCTTCTGCTGCAAGAAGCAGTGCTGGCAAACCAAGCACTGCCAGGTCAAGCCCTGCCAATGGCATCTTCCCAAAGTCACCATTGCCTGATGATACACCTTCTGATCTTGTGTCTCACCCTTCCCCTTCATTTCGTCGTCTTCTTTCTCTGAATGCTTCTGAGTGGAAACAGGGTCTGATTGGAAGCCTCTCAGCTATAGCTTTTGGCTCTGTTCAACCTATATATGCCTTAACCATTGGGGGTGTGATTTCTGCATTTTATGTTGAAAGCCACGAGGAAATGCGTCAAAGGATCAGGACTTATTGTTTGATTTTCTCTTTCCTCTCCCTTGCTTCTATCATCCTCAACCTCTTTCAACACTACAGTTTCGCTTACATGGGAGAGAAGTTAACCAAAAGGGTCAGATTGCGCATGCTGGAGAAGATCTTAACCTTCGAAACTGCTTGGTTCGATGAGGAACAAAACTCCAGTGGCGCCTTATGCTCAAGGTTAAGCAACGAAGCTTCCATGGTGAAATCGCTCGTTGCAGACCGAGTTTCCTTGTTAGTTCAAACCACTTCTGCTGTCACAATCGCAATGGTCATAGGGCTTGTGGTGGCATGGAAGCTCGCTCTTGTTATGATAGCAGTTCAACCACTTACAGTCCTCTGCTTTTATACACGAAAGGTGTTGCTCTCTGCCCTTTCAACCAAATTTATCAAGGCTCAAAACCAAAGCACCCAAATCGCAGTGGAGGCAGTTTATAATCATAGAATTGTAACTTCATTCGGAAGCATCAAAAAGGTTCTCAAACTATTTGATGAGGCTCAAGAGGCACCGAGGAAAGAAGCGAGGAAGAAGTCATGGCTTGCCGGAATCGGAATGGGTTCTGCTCTGTGCCTAACATTCATGTCATGGGCTTTGGATTTCTGGTTCGGCGGCACATTGGTGCAGAAGGGAGAAATATCAGCAGGGGATGTATTCAGGACATTCTTTGTGTTGGTTAGCACCGGCAAGGTCATAGCCGACGCCGGAAGCATGACCTCCGACCTTGCCAAAAGCTCAACGGCCGTCGCATCCGTGTTTCAAATCCTGGACCGCCAATCTCTAATTCCTAAGGCTGGAGATGGGACTAGTGGGTTGAAGTTGGAAAAGATGAGTGGGAAGATAGAGATGAAGAATGTTGATTTTGGTTATCCAAACAGGAGGGAGACCCCAATATTGATCAAGTTTTGCTTGGAGGTGAAGCCAGGAACAAGCATTGGACTAGTGGGGAAGAGTGGGTGTGGGAAATCCACAGTGATAGCTTTGATTCAAAGGTTCTATGACGTTGAGAGAGGGTGTGTCAAAGTGGATGGCATTGACATAAGAGAGCTAGACATTCATTGGTATAGACAGCACACAGCACTAGTCAGCCAAGAGCCTGTGATATACTCTGGCAACATACGCGACAACATCTTGTTTGGGAAGCCGGACGCATCAGAAAATGAAGTGGTGGAGGCTGGACGAGCTGCAAATGCTCATGAGTTCATCTCATCACTGAAGGATGGATACGAAACGGACTGTGGGGAGAGGGGGGTACAACTGTCAGGAGGGCAGAAGCAGAGAATAGCAATTGCAAGAGCCATAATTAGGAACCCAACAATATTACTGCTAGATGAGGCAACAAGTGCTCTGGACGTGCAATCTGAACAGGTAGTGCAAGAAGCACTTGATAGAGTAATGGTTGGGAGGACTACCATTGTGGTGGCACACAGACTTAACACTATCAAGCAACTTCACTCAATTGCCTATCTGCAAGACGGCAAGGTTCTTGAACGAGGAACCTATGCCCAGCTCAGGCACAAGAAAGGTGCCTTTTTCAACCTCTCCACCCATCAAACTTAG 3726 0.4538 MCSLGKEVSDQKGEMRGKERGGNSIAIIFKYADWIDVVLMVMGALGAIGDGMSTNVLLVFVSRIMNSLGYGNNQQNSGNFMAEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPLFFMHSSSFVSGVAFSAYFSWRLALVAFPTLLVLIIPGMLYGKYLIYLSKKCYKEYGKANAIVEQALSSIKTVYSFTAEKRITERYSDILDATSRLGVKQGIAKGLAVGSMGLSFAIWAFLAWYGSHLVMFKGESGGRIYAASVTFIMSGLSLGVALPDLKYFTEASVAASRIFDMIERIPSIDGEDTKGLVLESMSGKIEFEHVKFTYPSRPEAMVLKDFNLTVEAGKTVALVGASGSGKSTAIALLQRFHDADEGTVRIDGEDIRCLQLKCIRGKMGLVSQEHALFGTSIKENIMFGKPDATMDEVVAAATAANAHNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESESLVQNALDQASMGRTTLVVAHKLSTIRNADVIALVNGGCVIETGTHNELINRPNGYYAKLAKLQTQLSCDDQEQNPEISISSAARSSAGKPSTARSSPANGIFPKSPLPDDTPSDLVSHPSPSFRRLLSLNASEWKQGLIGSLSAIAFGSVQPIYALTIGGVISAFYVESHEEMRQRIRTYCLIFSFLSLASIILNLFQHYSFAYMGEKLTKRVRLRMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVTIAMVIGLVVAWKLALVMIAVQPLTVLCFYTRKVLLSALSTKFIKAQNQSTQIAVEAVYNHRIVTSFGSIKKVLKLFDEAQEAPRKEARKKSWLAGIGMGSALCLTFMSWALDFWFGGTLVQKGEISAGDVFRTFFVLVSTGKVIADAGSMTSDLAKSSTAVASVFQILDRQSLIPKAGDGTSGLKLEKMSGKIEMKNVDFGYPNRRETPILIKFCLEVKPGTSIGLVGKSGCGKSTVIALIQRFYDVERGCVKVDGIDIRELDIHWYRQHTALVSQEPVIYSGNIRDNILFGKPDASENEVVEAGRAANAHEFISSLKDGYETDCGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRVMVGRTTIVVAHRLNTIKQLHSIAYLQDGKVLERGTYAQLRHKKGAFFNLSTHQT 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0997 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0997 1241 FunFam ABC transporter B family member 4 356 613 - -
Bisa03g0997 1241 PANTHER ABC TRANSPORTER B FAMILY 10 691 IPR039421 -
Bisa03g0997 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 366 602 IPR003439 GO:0005524
Bisa03g0997 1241 CDD ABC_MTABC3_MDL1_MDL2 366 604 - -
Bisa03g0997 1241 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524|GO:0016887
Bisa03g0997 1241 ProSitePatterns ABC transporters family signature. 1142 1156 IPR017871 GO:0005524|GO:0016887
Bisa03g0997 1241 FunFam ABC multidrug transporter SitT 993 1241 - -
Bisa03g0997 1241 Pfam ABC transporter transmembrane region 43 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0997 1241 Pfam ABC transporter transmembrane region 680 949 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0997 1241 Gene3D ABC transporter type 1, transmembrane domain 28 906 IPR036640 GO:0005524|GO:0016020
Bisa03g0997 1241 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 339 - -
Bisa03g0997 1241 MobiDBLite consensus disorder prediction 612 659 - -
Bisa03g0997 1241 FunFam Putative ABC transporter B family member 8 645 988 - -
Bisa03g0997 1241 SMART AAA_5 393 594 IPR003593 GO:0016887
Bisa03g0997 1241 SMART AAA_5 1030 1222 IPR003593 GO:0016887
Bisa03g0997 1241 SUPERFAMILY ABC transporter transmembrane region 28 350 IPR036640 GO:0005524|GO:0016020
Bisa03g0997 1241 Pfam ABC transporter 384 533 IPR003439 GO:0005524
Bisa03g0997 1241 MobiDBLite consensus disorder prediction 612 640 - -
Bisa03g0997 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 994 1240 IPR027417 -
Bisa03g0997 1241 CDD ABC_6TM_Pgp_ABCB1_D2_like 668 984 - -
Bisa03g0997 1241 SUPERFAMILY ABC transporter transmembrane region 662 979 IPR036640 GO:0005524|GO:0016020
Bisa03g0997 1241 Gene3D - 993 1241 IPR027417 -
Bisa03g0997 1241 Pfam ABC transporter 1026 1170 IPR003439 GO:0005524
Bisa03g0997 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 679 966 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0997 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 604 IPR027417 -
Bisa03g0997 1241 FunFam ABC transporter B family member 1 27 365 - -
Bisa03g0997 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1003 1239 IPR003439 GO:0005524
Bisa03g0997 1241 Gene3D - 356 605 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0997 Bisa-ChrBisa03 13476062 13481958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0997 41 604 Calmodulin-binding Proteins AT2G36910 36.252 4.73e-102 351