Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0987 ATGTCAAATTTGCACTACATTTCGAATTTTTTAGTAGTTCTTGTTCTTCTTCTGATGCAAAATCCGAGTACAACGCTATGCCATACGAAGGGAGTTCGACCAAGGCGTTCTGGTGGGAGTGCGTTAACGACGAACATGACCCGAGTCCAATTCTCAGAAGAACAATTCTTAAGATGGGTCAAGTTTGTTGGTAGCCTCAGACACTCTGTTTTTGGAACAGCGAAAAATAAGCTTTTTCCTTCTTTCACTCTGTACGTCTCCAAGAAGCCGTCTGCTGCAAAATTTTCGTCAATTCAAGCGGCCGTCGATTCCATTCCGTTCATCAATCTCGTAAGAGTCGTCATTAAGGTCCACGCTGGGGTGTACACGGAGAAGGTGAACATTCCTCCTTTCAAATCATTCATAACCATACAAGGAGCAGGAGCAGACAAAACCATAGTTCAATGGGGAGACACGGCTCAATCAAAAGGGCCAAATGGGCAGCCTCTGGGAACCTACGGCTCTGCAACTTTTGCGGTGAATGCACCTTATTTCATTGCCAAGAACATCACATTCAAAAACACCTCGCCTGTTCCGGCACCAGGAGCGGTGGGAAAGCAAGCAGTGGCACTGAGAATATCAGCAGACACAGCAACCTTCCTGGGCTGCAATTTCTTAGGAGCACAGGACACACTGTATGATCACGTGGGGAGGCATTACTACAAAGACTGCTACATCGAAGGCTCTGTGGATTTCATATTCGGGAACGCCCTCTCTCTGTTTGAGAGATGTCACGTGCATGCGATAGCGCAGAATGTAGGGGCATTGACAGCACAGGGGAGAAGCAGCATACTGGAGGACACAGGGTTCTCGTTTGTGCACTGTAAGGTCACGGGATCAGGAGCACTGTACCTTGGAAGAGCCTGGGGTCCATTCTCTCGCGTCGTCTTTGCTTACACCAACATGGACAACATCATCATTCCCAAAGGCTGGTACAACTGGGGTGACCCTAATCGTGAAATGACTGTGTTCTATGGACAGTACAAATGCACAGGACCAGGAGCCAGATATGCAGGGAGGGTTTCGTGGTCCAGAGAACTCACTGATGCGGAAGCTAAGCCTTTTATTTCACTTACCTTCATCGATGGGAATGAATGGATCAAACTCTAG 1149 0.4778 MSNLHYISNFLVVLVLLLMQNPSTTLCHTKGVRPRRSGGSALTTNMTRVQFSEEQFLRWVKFVGSLRHSVFGTAKNKLFPSFTLYVSKKPSAAKFSSIQAAVDSIPFINLVRVVIKVHAGVYTEKVNIPPFKSFITIQGAGADKTIVQWGDTAQSKGPNGQPLGTYGSATFAVNAPYFIAKNITFKNTSPVPAPGAVGKQAVALRISADTATFLGCNFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFERCHVHAIAQNVGALTAQGRSSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTNMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGARYAGRVSWSRELTDAEAKPFISLTFIDGNEWIKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0987 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Bisa03g0987 382 Gene3D - 81 382 IPR012334 -
Bisa03g0987 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 80 381 - -
Bisa03g0987 382 FunFam Pectinesterase 80 382 - -
Bisa03g0987 382 Pfam Pectinesterase 91 377 IPR000070 GO:0030599|GO:0042545
Bisa03g0987 382 SUPERFAMILY Pectin lyase-like 79 381 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0987 Bisa-ChrBisa03 13304812 13306391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0987 93 380 Carbohydrate Esterase AT5G47500 51.557 8.47e-103 306