Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0974 ATGGAGACGAGCTGGATTCTGTGTTTCGATCTCCTCCTCCTCCTTCTTCTTAACCTCCGTTTAAATGCAGCGAAAGCAGTAGCCTTAAGAGTCGGCGGTGGCATTGGTGTCGGAGTAGGCGTTGGCGGCGGCGGCGGCGGAGTGTGGATTGGTGGCGGGGTTAACAGCCCGAGGCCGTCGGGATCTCCAGTGCCGGAGGCAGACAGAGCTTACACGGCTCTCCAGGCATGGAAATCGGCCATCACAGAGGACCCATTGGGGATTCTAGAGAGTTGGAATGGTCCTAACGTGTGTTCTTATAAAGGGGTGTTTTGTGCAAATCCCCAGGATGAAATGGCTGCATCATCGGGTACGGGTGGCCCTGTGGTTGCAGGAATAGATCTCAACCATGCCAATCTCAGAGGAACCCTTGTGAAAGAGCTCTCTCTGCTCACTGACATGTCTCTTCTCCACCTCAACAGCAATAGATTTTCTGGTACGGTTCCTAATACATTTAGAGACCTCTCGTCTTTGGAAGAGTTAGACCTCAGTAACAACCAACTCTCGGGTCCTTTCCCCACAGTTACTTTGTTTATGCCAAGTCTGGTTTACTTGGACCTCAGATTCAACTCCTTCTCGGGACCCCTCCCTGAAGATCTCTTCAACAAGAATCTCGATGCTATATTTCTCAACAACAATCAATTTGAAGGTGAAATCCCTCACAATTTGGGAAATTCCCCGGCTTCAGTCATCAATTTAGCCAACAACAAGCTGAGTGGAAATCTTCCTGCAAGTTTTGGTTTCATGGGTTCTAAGTTAAGGGAGATTCTGTTTCTCAATAACCAGTTATCTGGCTGCATTCCTGAAGGAGTAGGGCTCTTCACAGACGTGCAAGTTTTGGATGTGAGCTTCAATTCTCTAGTGGGTCATTTGCCAGACACCATATCTTGCCTTGAAGATATAGAAGTCCTCAATTTGGGGCATAACAAGCTTTCTGGAGAATTACCGGACGTGATCTGCTCTCTGAGAAGCCTCCTTAATCTAACTGTGGCTTACAATTTCTTATCTGGGTTCAGCCAGGAATGCTCGAGGCTTTTCATTAGGAATGTGGGTTTTGATTTCTCAGATAACTGCATTCCTGGGAAGGACATGCAGAGACCTCAACCAGACTGTTCTGTGATCCCAGGGGGTAGCCTAAATTGTCTCAGAATCCCTACTCCTAAGCCTCTTGTTTGTGGTTTGCTGGCTGCTACTCTCTCTAAGCACACTCGTCCCACTTCATCTTCCCCTTGA 1272 0.4811 METSWILCFDLLLLLLLNLRLNAAKAVALRVGGGIGVGVGVGGGGGGVWIGGGVNSPRPSGSPVPEADRAYTALQAWKSAITEDPLGILESWNGPNVCSYKGVFCANPQDEMAASSGTGGPVVAGIDLNHANLRGTLVKELSLLTDMSLLHLNSNRFSGTVPNTFRDLSSLEELDLSNNQLSGPFPTVTLFMPSLVYLDLRFNSFSGPLPEDLFNKNLDAIFLNNNQFEGEIPHNLGNSPASVINLANNKLSGNLPASFGFMGSKLREILFLNNQLSGCIPEGVGLFTDVQVLDVSFNSLVGHLPDTISCLEDIEVLNLGHNKLSGELPDVICSLRSLLNLTVAYNFLSGFSQECSRLFIRNVGFDFSDNCIPGKDMQRPQPDCSVIPGGSLNCLRIPTPKPLVCGLLAATLSKHTRPTSSSP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0974 423 SUPERFAMILY L domain-like 71 372 - -
Bisa03g0974 423 Gene3D Ribonuclease Inhibitor 244 385 IPR032675 -
Bisa03g0974 423 Gene3D Ribonuclease Inhibitor 68 243 IPR032675 -
Bisa03g0974 423 SMART LRR_typ_2 144 167 IPR003591 -
Bisa03g0974 423 SMART LRR_typ_2 168 191 IPR003591 -
Bisa03g0974 423 SMART LRR_typ_2 192 216 IPR003591 -
Bisa03g0974 423 SMART LRR_typ_2 311 335 IPR003591 -
Bisa03g0974 423 FunFam Leucine-rich repeat extensin-like protein 1 71 238 - -
Bisa03g0974 423 Pfam Leucine rich repeat N-terminal domain 70 105 IPR013210 -
Bisa03g0974 423 PRINTS Leucine-rich repeat signature 171 184 - -
Bisa03g0974 423 PRINTS Leucine-rich repeat signature 311 324 - -
Bisa03g0974 423 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 261 351 - -
Bisa03g0974 423 Pfam Leucine rich repeat 149 204 IPR001611 GO:0005515
Bisa03g0974 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0974 Bisa-ChrBisa03 13138412 13139683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0974 65 396 Leucine-rich Repeat extension Gene Families AT3G24480 49.704 9.30e-104 315