Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0961 ATGTCACAAGCGATGGCGACGTGGTCCAAAGCGGAGAAAGATGATACGAAGCACCATCAAACTTCGGCTTCGAAAGCGTTCGTCTTCTTTGCTCCTTCGTCCACTGTGGAGGCGCCGGAGTCGCGACAACAGAGACCGGACAATGCCGGAATCCCGATCACAGCCATGGGAAGAGCTCCATGCTGTGACAAAGCTAACGTGAAAAGAGGGCCCTGGTCTCCTGAAGAAGATGCCACTCTCAAGAACTACCTCGAGAAACATGGCACTGGAGGTAATTGGATAGCTCTCCCTCAAAAAGCAGGTCTTAAGCGTTGTGGGAAGAGCTGTCGTCTGAGATGGCTCAACTATCTCAGGCCTCACATTAGGCTTGGTGGTTTCACTGTGGAAGAAGACAAAATTATCTGCTCCCTCTATTCTACTGTCGGAAGCAGGCAAATACCCTTTCTTTTATTTATTTTCTTGTGGTCTCTCATAGCTGCTCAATTGCAAGGAAGAACCGACAACGATGTGAAAAACCACTGGAACACGAAATTAAAGAAGAAGTTTATGGCAGGAAACGCTAATATTAATGGCAGCAGCAACATGAGCAATGGTGCTAGTTACGTGCACTTATCATCTTTTTCTCCTGAACCACGCCGAGTTGAAGGCTTTGTGTTTGATCACAAGAATTCAGTCTGTTTTGAAACTCTGGACCAAAATCAACCTCTGGAATCGCAAGTTTCGGATTTTGGCATGCCATCTTCTGAGCAAGTTTCAACTTCTTCAGCTAGCTTGGCAGAAGAGAACAACGATCACACTAGATGGTTTGGATTCGAGGATGCTGATGAAGATGATGTCAATCTGCTTGATTTTGTGTATGATGATCTCCTCAATGGCTTTGCTGCTTAA 888 0.4595 MSQAMATWSKAEKDDTKHHQTSASKAFVFFAPSSTVEAPESRQQRPDNAGIPITAMGRAPCCDKANVKRGPWSPEEDATLKNYLEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPHIRLGGFTVEEDKIICSLYSTVGSRQIPFLLFIFLWSLIAAQLQGRTDNDVKNHWNTKLKKKFMAGNANINGSSNMSNGASYVHLSSFSPEPRRVEGFVFDHKNSVCFETLDQNQPLESQVSDFGMPSSEQVSTSSASLAEENNDHTRWFGFEDADEDDVNLLDFVYDDLLNGFAA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0961 295 Gene3D - 62 122 - -
Bisa03g0961 295 MobiDBLite consensus disorder prediction 238 259 - -
Bisa03g0961 295 ProSiteProfiles Myb-like domain profile. 64 117 IPR001005 -
Bisa03g0961 295 ProSiteProfiles Myb-like domain profile. 118 178 IPR001005 -
Bisa03g0961 295 Gene3D - 125 199 - -
Bisa03g0961 295 SMART sant 122 180 IPR001005 -
Bisa03g0961 295 SMART sant 68 119 IPR001005 -
Bisa03g0961 295 CDD SANT 126 178 IPR001005 -
Bisa03g0961 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 121 IPR017930 -
Bisa03g0961 295 FunFam Transcription factor RAX3 62 123 - -
Bisa03g0961 295 CDD SANT 71 117 IPR001005 -
Bisa03g0961 295 Pfam Myb-like DNA-binding domain 126 176 IPR001005 -
Bisa03g0961 295 Pfam Myb-like DNA-binding domain 69 117 IPR001005 -
Bisa03g0961 295 SUPERFAMILY Homeodomain-like 66 174 IPR009057 -
Bisa03g0961 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 182 IPR017930 -
Bisa03g0961 295 PANTHER OS09G0431300 PROTEIN 56 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0961 Bisa-ChrBisa03 12968126 12973217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0961 56 187 MYB Transcription Factor Family AT2G36890 74.242 6.04e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g0961 Myb_DNA-binding 1.5e-08 CL0123