LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g0947	ATGGGTCGCCGAAAGAACAACAATCAGAGCTCTAGTGGCGGCAGCATTAGTAAAATGAATCAACACAATCGATTCGAAGATGCAGATGAAATCATTGAGGATGCTGCAGTGAGCTCCAACCTCGAAAACTCCGTTTGCGAGCCTGATGGCTCCGTAGACAAAGCCGTTGAAGGCTCAGCTGTCGAGCCTGACGCGGTCTTTATCGATGCAGATGATAAAACAAGTGCCGACTATTACTTCGATTCGTACTCTCACTTTGGAATTCACGAAGAAATGTTGAAAGACTCGGTGAGAACTAAAACATATCAAAATGTAATTTATCAGAATAAGTTCTTGTTCAAGAATAAAGTGGTTCTTGACGTGGGTGCTGGGACTGGAATTTTATCACTATTTTGTGCCAAAGCAGGGGCCCAACATGTGTATGCAGTGGAGTGCTCCGAAATGGCTGATGTGGCAAAGGAGATTGTTGATACTAATGGGTTTTCTAATGTTATAACAGTTCTAAAGGGGAAAATGGAAGAAATTGAACTTCCGGTTGCAAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTGAATACTGTCCTCTATGCACGTGACAAATGGCTGGTGGATGATGGAGTAGTGCTACCAGATAAAGCGTCTCTCTATCTTACAGCAATTGAAGATGCGGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCAATTATGGAGCCACTTGTTGATACAGTTGACAAAAATCAGATTGTTACAAATTGCCAGTTACTCAAGACTATGGATATCTCTAAGATGCTACCTGGAGATGCCTCCTTCACTGCACCTTTTAAGCTTGTAGCTGAACGTGATGATTACATCCATGCACTCGTCGCATATTTTGATGTATCATTTACCAAGTGTCATAAGTTGATGGGCTTCTCTACAGGGCCAAGATCACGTTCGACTCATTGGAAGCAAACAGTGCTTTACCTAGAAGACGTGTTGACCATTTGTGAGGGAGAGGCAATTGTAGGGAGCATGACCGTGGCACAAAATAAAAAGAATCCTCGAGATGTTGATATAATGCTCAAGTTTTCACTAAATGGACGGCGATGCACAGTTTCAAGGGTTCAGTATTACAAGATGCGCTGA	1194	0.4146	MGRRKNNNQSSSGGSISKMNQHNRFEDADEIIEDAAVSSNLENSVCEPDGSVDKAVEGSAVEPDAVFIDADDKTSADYYFDSYSHFGIHEEMLKDSVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAQHVYAVECSEMADVAKEIVDTNGFSNVITVLKGKMEEIELPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGVVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDKNQIVTNCQLLKTMDISKMLPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRSTHWKQTVLYLEDVLTICEGEAIVGSMTVAQNKKNPRDVDIMLKFSLNGRRCTVSRVQYYKMR	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g0947	397	Gene3D	-	221	397	-	-
	Bisa03g0947	397	FunFam	Blast:Protein arginine N-methyltransferase 1	221	397	-	-
	Bisa03g0947	397	MobiDBLite	consensus disorder prediction	1	22	-	-
	Bisa03g0947	397	PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE	50	384	IPR025799	GO:0016274\|GO:0018216
	Bisa03g0947	397	Pfam	Ribosomal protein L11 methyltransferase (PrmA)	113	188	-	-
	Bisa03g0947	397	ProSiteProfiles	SAM-dependent methyltransferase PRMT-type domain profile.	76	377	IPR025799	GO:0016274\|GO:0018216
	Bisa03g0947	397	FunFam	probable protein arginine N-methyltransferase 1	67	219	-	-
	Bisa03g0947	397	MobiDBLite	consensus disorder prediction	1	21	-	-
	Bisa03g0947	397	Gene3D	Vaccinia Virus protein VP39	67	219	IPR029063	-
	Bisa03g0947	397	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	82	396	IPR029063	-
	Bisa03g0947	397	CDD	AdoMet_MTases	118	218	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g0947	Bisa-ChrBisa03	12749775	12754474	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g0947	53	360	C2H2 Transcription Factor Family	AT3G12270	39.039	3.68e-67	222