Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0940 ATGGAAATGCCCGGTAGAAGATCCAACTACACACTTCTGAGTCAAATTCCCGATGACAAGAACGGTGGCGGAGCCGCCTTGTCCGGAACAGCTGCTTCATCTTCGTTGTTTGATACTTCGTCTGGGGAAGGAAAGAACAATAAAGGCAAGTTGGATAGAGGTTTTGATTGGGACTCGGGTGCTGATCATAGAGTGACTCAGCCGGGGAACCGGATCGGAAATTTGTATTCATCGATCGGATTGCAGAGGCAGTCTAGTGAGAGCAGTTTTGGTGAAAGCTCGCTATCAGGTGAGTATTATGCTCCAACTCTGTCTACAGCAGCTACGAATGAGATCGATGCCTTTGGTTATATGCATGATGAGGGACTCAAGATTGGTGGAGGCGCTGGTGTTGGGGGCGTGCTAAGGAGAAAGTTGACGGAATCTACAGTGAGAACGGGAGGGTCATCATCAGGAAAAAGTTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGCAGGCTTTGGCACTTCGTCTTTCGTCTGAGGCAGCTTGTGCTGATGATCCCAATTTCCTGGATCCAGTACCAGATGAATCTGTTTTAAGGTCGTCGTCCTCAAGTTCGCCAGAGACAGTATCACATAGATTCTGGGTGAATGGCTGCTTATCATACTCTGACAAAATTCCTGATGGCTTTTACCTAGTTCAAGGGATGGATCCCTATGTGTGGACTTTGTGCACTGATTTGCAGGAAAATGGTCGAATTCCATCACTAGAATCACTTAAGTCTGTGAATTCCTGCTCTGACTCTTCACTTCAAGTAGTTTTAATTGATCAACAAAGTGATCCCAGCTTAAAGGAATTGCAAAATAGAGTACATAGCATTTCTTGTAGCTGTAGAACCTCAAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACTGTATGGGGGGTTCAGCTTCCGTTTGGGAAGACGACTTTGTTTCCATTTGGAGGGAATGCATTAATGATCTTAAAGATTGCTTGGGATCTGTTGTTGTTCCAATAGGTAGTCTTTCTGTTGGCCTCTGCAGGCATCGTGCTATATTATTTAAAGTATTAGCTGATACCATTGACTTACCGTGCCGAATTGCAAAGGGATGTAAATATTGCTCAAGAGATGATGCTTCTTCTTGTCTTGTACGATTTGGACTCAGTAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTGCTTGTGCGAACCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTTCAAGACTTAAACCAGCTGAAACTACGATTGATTTCAGGTCACTGGCCAAACAGTACTTCTCAGATTGTCTGTCTCTTGAGCTTGCTTTTGACAATAATTCTTCAGAGGGAGAAGATGATGAAGGCAATGAGAAGGAAGAGACAGATAACAAACAGCTCGCGTTTGCTCTGCAGCCTGGCCTCACACAGATATGGGAAGATGTATTGGGGTTTGAGAATGTTGCTGCAGATGGGGAAAAAATTATCATAAATCCTAATTATAGTTATGTCCTTCGAGAAGGGGATGAAGTCCTTATTATAGCTGAGGATGATGACACTTATGCTCCAGGTCCTCTTCCAGAGGTACGCAAGGGTCTTTTCCTAAAGATACCTGATCCACCTAAATATCCAGAGAAGATATTATTTTGTGGTTGGCGCCGTGATGCTAAAGATATGAATATGGTTCTTGAGGCATTCTTAGTTCCTGGTTCGAAACTGTGGATATTTAATGTGGTTCCTGAAAAGGAAAGAGCGAAAAAGCTTATTGATGGTGGACCTTATGTTTCTAGGCTAGAGAACATAAAACTTGTCCATCAAGAGGGAAACACATATGGTTTGGGTGGTTATTTTTCTTGGCACTTATACCCTAAATTTTATAGTAGAGGAGTTGTTGCTGATGGGGATTCTGATTTCCACATTTCAGAACAGTTTGATGGGAAGTTGAGGGACAGAAATAACCCTGACAACAACAGAACAAAAAATCAAGGTTCTGAAGCGATTAAATCATATAAGCCTCCCCAGATTATTGTAGACTCTACAACTTTGGGCAAGAATCCACTGCCTATAAAGCATAACCAACCTGTTGGCCATAGAGATATGCCGAAGCCTTTGGTACTTTCAAATCCAACTGATGATATTGAGAAAAGGCAGTTTGGTGATGGAAGCCAACTGGTTCCTCGCAAACCAAGCAGAGAACTTGGCCTTGATATGGAGGATTTGGACATACCATGGAGCGATCTTGTTTTAAAAGAACGAATAGGATCAGGTTCTTTTGGAACAGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTTAAAATTCTGATGGAGCAAGATTTTCATGCTGAACGTTTCAAGGAATTTCTGCGGGAGGTTGCTATAATGAAGCGCTTGAGACATCCAAACATTGTTTTATTTATGGGCGCAGTCACTCAGCCTCCAAACTTATCAATTGTCACAGAATATTTAGCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAGGAGATGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAGACGTAATCCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAAATATACAACGAAGGTTTGTGATTTTGGGCTTTCCCGTCTAAAGGCAAATACATTTCTCTCATCTAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCCCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCAGATGTTTACAGCTTTGGTGTAATCTTGTGGGAGCTTGCAACATTACAACAGCCCTGGAGTAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGTTTCAAGGGCAAAAGGCCTGAGATCCCACATGATTTGAATCCACAAGTAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGTCCTTCTTTTGAAAGTATCATGGATTCTTTAAGGTCATTGGTCAAACCCCCTACACCTCAACCGGGTCATCCAAACAGGCCGAATACATTGTTTTACGTTTTAGAAGTCTCAGCCCGAGAGTCACAGCTGTATATTTGTCTCCTAATTCGGATTAAGAAGTGTGATATTCAACACAGCAAAGATACTCCTCCTTTATTGCAACAAAATATTGTTTGA 3234 0.4307 MEMPGRRSNYTLLSQIPDDKNGGGAALSGTAASSSLFDTSSGEGKNNKGKLDRGFDWDSGADHRVTQPGNRIGNLYSSIGLQRQSSESSFGESSLSGEYYAPTLSTAATNEIDAFGYMHDEGLKIGGGAGVGGVLRRKLTESTVRTGGSSSGKSWAQQTEESYQLQQALALRLSSEAACADDPNFLDPVPDESVLRSSSSSSPETVSHRFWVNGCLSYSDKIPDGFYLVQGMDPYVWTLCTDLQENGRIPSLESLKSVNSCSDSSLQVVLIDQQSDPSLKELQNRVHSISCSCRTSKEVVDQLAKLVCNCMGGSASVWEDDFVSIWRECINDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLSREYLVDLIGKPGCLCEPDSLLNGPSSISFSSPLRFSRLKPAETTIDFRSLAKQYFSDCLSLELAFDNNSSEGEDDEGNEKEETDNKQLAFALQPGLTQIWEDVLGFENVAADGEKIIINPNYSYVLREGDEVLIIAEDDDTYAPGPLPEVRKGLFLKIPDPPKYPEKILFCGWRRDAKDMNMVLEAFLVPGSKLWIFNVVPEKERAKKLIDGGPYVSRLENIKLVHQEGNTYGLGGYFSWHLYPKFYSRGVVADGDSDFHISEQFDGKLRDRNNPDNNRTKNQGSEAIKSYKPPQIIVDSTTLGKNPLPIKHNQPVGHRDMPKPLVLSNPTDDIEKRQFGDGSQLVPRKPSRELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLARGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTTKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVGFKGKRPEIPHDLNPQVAAIIEACWANEPWKRPSFESIMDSLRSLVKPPTPQPGHPNRPNTLFYVLEVSARESQLYICLLIRIKKCDIQHSKDTPPLLQQNIV 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0940 1077 Pfam Protein tyrosine and serine/threonine kinase 763 1016 IPR001245 GO:0004672|GO:0006468
Bisa03g0940 1077 Gene3D Phosphorylase Kinase; domain 1 755 840 - -
Bisa03g0940 1077 MobiDBLite consensus disorder prediction 696 718 - -
Bisa03g0940 1077 MobiDBLite consensus disorder prediction 45 60 - -
Bisa03g0940 1077 SMART serkin_6 762 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g0940 1077 Pfam Ethylene-responsive protein kinase Le-CTR1 204 409 - -
Bisa03g0940 1077 ProSiteProfiles Protein kinase domain profile. 762 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g0940 1077 PRINTS Tyrosine kinase catalytic domain signature 836 849 IPR001245 GO:0004672|GO:0006468
Bisa03g0940 1077 PRINTS Tyrosine kinase catalytic domain signature 943 965 IPR001245 GO:0004672|GO:0006468
Bisa03g0940 1077 PRINTS Tyrosine kinase catalytic domain signature 877 895 IPR001245 GO:0004672|GO:0006468
Bisa03g0940 1077 PRINTS Tyrosine kinase catalytic domain signature 924 934 IPR001245 GO:0004672|GO:0006468
Bisa03g0940 1077 PRINTS Tyrosine kinase catalytic domain signature 987 1009 IPR001245 GO:0004672|GO:0006468
Bisa03g0940 1077 MobiDBLite consensus disorder prediction 27 44 - -
Bisa03g0940 1077 Gene3D Transferase(Phosphotransferase) domain 1 841 1026 - -
Bisa03g0940 1077 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 175 1020 - -
Bisa03g0940 1077 MobiDBLite consensus disorder prediction 1 69 - -
Bisa03g0940 1077 MobiDBLite consensus disorder prediction 659 683 - -
Bisa03g0940 1077 ProSitePatterns Protein kinases ATP-binding region signature. 768 789 IPR017441 GO:0005524
Bisa03g0940 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Bisa03g0940 1077 SUPERFAMILY Protein kinase-like (PK-like) 748 1015 IPR011009 -
Bisa03g0940 1077 FunFam Serine/threonine-protein kinase isoform 1 752 840 - -
Bisa03g0940 1077 FunFam Serine/threonine-protein kinase CTR1 841 1026 - -
Bisa03g0940 1077 CDD STKc_MAP3K-like 768 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0940 Bisa-ChrBisa03 12643807 12657365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0940 1 465 MAP Kinase Kinase Kinase AT5G03730 65.971 4.81e-171 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa03g0940 PK_Tyr_Ser-Thr 4e-70 CL0016