Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0929 ATGGGAAGGCGCGCTGCCCTGCGTCTCCTTCCCAATTTGCAAGGAGCTCTCCGGAAGGAACCCTGTAATTCCATTTTTGTCTCTCTTTCCCTTTCCTTCTGCTCCCAACCCCTTTCAGATTCAGATGCAATTGTCGAAACCCACCATTCCCACAACACTGAGCTTCCTCTCGAAGATAATTCTGCATCCGATCCCCAAGAACAGGAACGGCTTCAATACGTTCGGAAGCTTCGAAATTTACTTGAAGAGGGTAATGGATATGCTGCCCAAAGTTTCATCAAATCCCTTCTTCTCTCTAAAAACCCAGTTTCTTCTCCCTTCGAACTCCTCCACAGCTTCTCCCTCTCTTCGCCCTCCTTGAAACCCGTCCTGTCAAACATGCTGTTATGGGCTTGCTCCGAGCCGGAAATGCTCAATGAAGCTACGGAGTTGTACTCTTTGATGAGGAAAGAGGGTATGCATCCTTCGAAAGGTTCTGTGAATCGGTTACTCGAAGCTTTGGTGACTTCCAAGCAGTATGAGAAAACTCTTGATCTGTTCTCTGATTTTGTGGAGTCTGGTATTCGACCCAATACTTTCTCCTACAGTAAAGCTCTTCAGGCAGCAGTGATGCTTAGGGACTTTAAAAGAGGTTTTGAGTTGATGAATGCAATGGACGAGGCAGGGGTTAGGCCATCTGTATTTACGTATAACTTGGTGATAGGTGGTTTGTGTAAAGTGCGGAGAATAACGGACGCTCACAACCTATTTGATGAAATGCTTAACAGAAAGCTGGCTCCGGGTTTGGTTACCTATAATACGCTGATTGATGGATGCTGTAAGGTGGGAGAAATAGAGACAGCTTTTAGTTTGAGAGATAGGATGAGGGCCCAAAATAAGGAGCCTAATCTTGTCACGTACAATTCTTTGTTAAGGGGACTTTGTGATTCACAGAGGATGGCAGAAGCGAGGAAGTTATTGCAAGAGATGGAGGCTAATGGGTTCTTGCCTGAGGGATCTACTAGAATTATATTTGATGATCCTTCAAGTTGTGGAGATGATGATGCTTCATTGGATCCACGTGAAAAAATGTTCCACAAAGGTGGAACAATCGATGGGTATACTTGTTGTATTTTGTTGAATGGACTATGCAGAGCGGGGATGATTGAAAAGGCCGAGGATGTTTTGGCGAAGTTAACAGAGAATGGATTTGTACCAAATAAGGTAGTGTATAACATATTAGTGAATGCATATTGCCAAGAGGGTGACATGAAGAAAGCCATATTGACAATCCAACAAATGGAAGAACGTGGGCTGAAGGCTAGCTGTATCACTTTCAATACCCTTATTAATAAGTGTTTTGAAACAAGGGAGGTGGACCAAGCAGAGAAATGGTTTAGGAAGATGGAAGAGAATGGTATTTCCCCCAGTTTGGAGACATATAACATTTTAATTAAAGGTTATGGCCATATGAGTCAATTTGACAGGTGTTTTCAGATTCTCGAGGAAATGGAAGAAACGGGGATAATGCCAAATGTCTTAAACTATGGTGCTCTGATAAATTGTCTATGCAAAGAAAGTAAGCTTCTTGAAGCTGAAGTTATCCTTGCCGATATGACAGGCCGTGGGGTTTCTCCAAACGCAGAAATATATAATATGCTCATTGATGGTAGTTGCTCGATGGGTAAACTGAAAGATGCCTTTAGATTTTTTGATGAAATGATTAAAAATGGAACAGATCCAACTCTTGTGACATATAATACGCTGATAAATGGACTCGGAAGAAATGGAAGGATAACGGAAGCTGAGGATCTCTTTCTCCAAATGACCAGCAAAGGTCATAATCCAGATGTAATCACATACAATTCCCTGATCTCAGGATATGCTAGGTCAGGAAACACCCAGAAATGCCTCGAGTTGTATGATTATATGAAGAAACTGGGCATAAAACCTACTATAAAGACGTTTCATCCTTTGATCAATGCATGCAGCAAGGAAGGGGTGGCAACAGCAGAGAGGATATTTCAGGAATTGTTAGAAATGGATTTGGTTCCAGATCGAGTGGTATATAATGCAATGATTTACAGGTACGCTGAAGAAGGAGACGTTGAAAAGGCAAACTGTGTGCACCAAAGGATGGTTGAACAGGGGATTGAGTCGGACAAGGTAACTTATAAGGGCTTGATTCTAGCGTACCTTAGAGATGGAAGGGTGTCAGAAGTAAAGCATTTTGTTGATGATATGAAGGCTAAAGGAGCGGTTCCACAAACTGATACATATAACATACTGGTGAAGGGACATTGCGACTTAGAAGACTTCAATGGGGCATATATTTGGTATAGGGAAATGTTTGACAGAGGTTTTACCCTGAATGAACGCATCTGCGGTGAACTTGTCTCCGGACTTACAGAGAAGGGAATGCGACAGGAAGCCCAAATTGTCTCCTCACAATTGATTGGCTCGGATGAAGCCGTTGCTATTTAA 2463 0.4255 MGRRAALRLLPNLQGALRKEPCNSIFVSLSLSFCSQPLSDSDAIVETHHSHNTELPLEDNSASDPQEQERLQYVRKLRNLLEEGNGYAAQSFIKSLLLSKNPVSSPFELLHSFSLSSPSLKPVLSNMLLWACSEPEMLNEATELYSLMRKEGMHPSKGSVNRLLEALVTSKQYEKTLDLFSDFVESGIRPNTFSYSKALQAAVMLRDFKRGFELMNAMDEAGVRPSVFTYNLVIGGLCKVRRITDAHNLFDEMLNRKLAPGLVTYNTLIDGCCKVGEIETAFSLRDRMRAQNKEPNLVTYNSLLRGLCDSQRMAEARKLLQEMEANGFLPEGSTRIIFDDPSSCGDDDASLDPREKMFHKGGTIDGYTCCILLNGLCRAGMIEKAEDVLAKLTENGFVPNKVVYNILVNAYCQEGDMKKAILTIQQMEERGLKASCITFNTLINKCFETREVDQAEKWFRKMEENGISPSLETYNILIKGYGHMSQFDRCFQILEEMEETGIMPNVLNYGALINCLCKESKLLEAEVILADMTGRGVSPNAEIYNMLIDGSCSMGKLKDAFRFFDEMIKNGTDPTLVTYNTLINGLGRNGRITEAEDLFLQMTSKGHNPDVITYNSLISGYARSGNTQKCLELYDYMKKLGIKPTIKTFHPLINACSKEGVATAERIFQELLEMDLVPDRVVYNAMIYRYAEEGDVEKANCVHQRMVEQGIESDKVTYKGLILAYLRDGRVSEVKHFVDDMKAKGAVPQTDTYNILVKGHCDLEDFNGAYIWYREMFDRGFTLNERICGELVSGLTEKGMRQEAQIVSSQLIGSDEAVAI 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 296 330 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 121 155 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat 752 781 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat family 678 722 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat family 609 657 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat family 225 274 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat family 539 586 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 540 574 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 261 295 IPR002885 -
Bisa03g0929 820 Pfam Pentatricopeptide repeat domain 425 483 IPR002885 -
Bisa03g0929 820 Pfam Pentatricopeptide repeat domain 356 412 IPR002885 -
Bisa03g0929 820 Gene3D Tetratricopeptide repeat domain 450 555 IPR011990 GO:0005515
Bisa03g0929 820 Gene3D Tetratricopeptide repeat domain 342 449 IPR011990 GO:0005515
Bisa03g0929 820 Gene3D Tetratricopeptide repeat domain 93 204 IPR011990 GO:0005515
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 156 190 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 612 645 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 716 748 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 752 784 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 543 575 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 402 435 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 367 400 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 263 296 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 437 470 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 509 541 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 298 330 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 473 506 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 228 260 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 577 611 IPR002885 -
Bisa03g0929 820 NCBIfam pentatricopeptide repeat 681 714 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 679 713 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 610 644 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 470 504 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 226 260 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 505 539 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat 501 532 IPR002885 -
Bisa03g0929 820 Pfam PPR repeat 294 324 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Bisa03g0929 820 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 344 660 - -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 749 783 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Bisa03g0929 820 Gene3D Tetratricopeptide repeat domain 662 817 IPR011990 GO:0005515
Bisa03g0929 820 SUPERFAMILY HCP-like 371 512 - -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 714 748 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 191 225 IPR002885 -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 435 469 IPR002885 -
Bisa03g0929 820 Gene3D Tetratricopeptide repeat domain 556 661 IPR011990 GO:0005515
Bisa03g0929 820 Gene3D Tetratricopeptide repeat domain 205 339 IPR011990 GO:0005515
Bisa03g0929 820 MobiDBLite consensus disorder prediction 47 66 - -
Bisa03g0929 820 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 575 609 IPR002885 -
Bisa03g0929 820 SUPERFAMILY HCP-like 540 644 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0929 371 820 Glycosyltransferase AT1G05670 25.462 8.49e-57 206