Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0918 ATGAAATCAAGAGAAGATTCACAGCAGGCAGCAGCCATGGTTCTCAAGACTGAGCTTTGTCGATTCAGTGGGGCCAAGATATACCCTGGGAAAGGTATCAGATTTGTTCGCGCTGATTCTCAGGTATTCTTGTTTGCCAACTCAAAATGCAAAAGATATTTCCACAACCGATTGAAGCCATCAAAGCTCACCTGGACAGCCATGTATAGGAAGCAACACAAGAAGGACATTGCTCAAGAAGCTGTGAAGAAGAGGCGTCGCGCTACCAAAAAGCCCTACTCTAGGTCTATTGTTGGAGCTACTTTGGAGGTTATTCAGAAGAAAAGAACTGAGAAGCCTGAGGTTCGAGATGCAGCTAGGGAAGCTGCTCTTCGTGAAATCAAGGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCGGAAGTTATGGCTAAGGCACAAAAAGCTGGAGGCAAAAGCAACATTCCCAAGGGTGCCGTACCCAAAGGCCCTAAACTTGGTGGTGGGGGTGGCAAGCGCTGA 531 0.4708 MKSREDSQQAAAMVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKAQKAGGKSNIPKGAVPKGPKLGGGGGKR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0918 176 SMART 4TRASH 20 58 IPR011017 -
Bisa03g0918 176 Gene3D - 81 152 - -
Bisa03g0918 176 Pfam Ribosomal protein L24e 16 79 IPR000988 -
Bisa03g0918 176 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 18 70 - -
Bisa03g0918 176 ProSitePatterns Ribosomal protein L24e signature. 22 39 IPR023442 -
Bisa03g0918 176 MobiDBLite consensus disorder prediction 131 148 - -
Bisa03g0918 176 FunFam 60S ribosomal protein L24 15 76 - -
Bisa03g0918 176 PANTHER 60S RIBOSOMAL PROTEIN L24 16 152 IPR000988 -
Bisa03g0918 176 MobiDBLite consensus disorder prediction 131 176 - -
Bisa03g0918 176 Gene3D Ribosomal protein L24e 15 76 IPR038630 -
Bisa03g0918 176 CDD Ribosomal_L24e_L24 15 68 IPR000988 -
Bisa03g0918 176 Coils Coil 124 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0918 Bisa-ChrBisa03 12264016 12265984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0918 13 169 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.713 8.18e-87 250
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0918 03 12264016 12265984 Bisa07g2294 07 52496236 52498200 CCT
Bisa03g0918 03 12264016 12265984 Bisa03g0918 03 12264016 12265984 ECH