Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0904 ATGAACAACAACGTGGAAGCCCACCATGTAGGCTCATACATGAACCCTCTAATCATCTGTGGCGCCGGCATCATCTGTTCCTTCCTGGCTTTAGCCACATACCACTTCATTCTCTGTAAACTCTGCCTTCGCACTCATCACCCCCAACTTCAATTGCACCAAATCGCCGATACGAGTCCCACACATTCCATAGACATACCCTGTGGTGTGGACCCTGAGATCCTCAACAAGATCCCCATCCTCTCCTTTTCTCCTCAGAAACGCGACGTTTTTGGATTGCATCAGAGTGAATGTGCCATTTGCTTGGGGGAATTAGAGCGCGGAGAGAAGCTTCGTCTCTTGCCTTCTTGCAGTCACGCCTTTCACATCCCCTGCATCGATCTATGGTTATCCAAGCATTCCAATTGCCCTTTTTGTCGCGCCCCCATCGCCATCGCATCTCCACCCTCCTTCTCCCTGCCTTCTCGAAACGTCGACGATCACGAATTTGAAGTGCTATCTCGTCACGTGGTCCCTCCCCTTCAGGACTCTTCTGCTTCGTCTGATCATTCGAGTGCGTCGAGTTCCAGATCGCACGCGCCTCGTCCATTGCTTCAGCACTCGCTCTCTGTGGCCTATGCCTCGCGGGAGAGGCCGGAGGCGTTGGTGATGGGCTTGAAGAGATCGTTGTCGATGGATCAGTCCTGTGGTGTTGCGATTAGCATACAGATAGATCAGGAAAAACCTTCCACTTCTTCTTCTTCTTCTCCTTCTTCTTCCTCTGCCGCCGATGCGTGGGCACGGAATGAGGTCATTCAGGGTAAAGCTATATCGCTCAGGCAGCTTGATCACGTGTCCACCATGTTGATGACGTCTCTCACGCAATTAAGGAATACTAGAAATGAAGCATCCAGAGCAATTCTACCTGATTGA 912 0.5121 MNNNVEAHHVGSYMNPLIICGAGIICSFLALATYHFILCKLCLRTHHPQLQLHQIADTSPTHSIDIPCGVDPEILNKIPILSFSPQKRDVFGLHQSECAICLGELERGEKLRLLPSCSHAFHIPCIDLWLSKHSNCPFCRAPIAIASPPSFSLPSRNVDDHEFEVLSRHVVPPLQDSSASSDHSSASSSRSHAPRPLLQHSLSVAYASRERPEALVMGLKRSLSMDQSCGVAISIQIDQEKPSTSSSSSPSSSSAADAWARNEVIQGKAISLRQLDHVSTMLMTSLTQLRNTRNEASRAILPD 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0904 303 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 165 IPR044675 -
Bisa03g0904 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 146 IPR013083 -
Bisa03g0904 303 MobiDBLite consensus disorder prediction 174 195 - -
Bisa03g0904 303 FunFam E3 ubiquitin-protein ligase ATL6 59 146 - -
Bisa03g0904 303 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Bisa03g0904 303 SMART FANCL_C_2 94 148 - -
Bisa03g0904 303 SUPERFAMILY RING/U-box 97 146 - -
Bisa03g0904 303 CDD RING-H2_EL5-like 97 140 - -
Bisa03g0904 303 SMART ring_2 98 139 IPR001841 -
Bisa03g0904 303 Pfam Ring finger domain 97 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0904 Bisa-ChrBisa03 12070918 12071829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0904 23 153 C3H Transcription Factor Family AT5G17600 37.681 2.02e-23 97.1