Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0860 ATGGGTAGAGCTCCTTGCTGCGACAAGGCAAATGTAAAGAAAGGACCGTGGTCTCCGGAAGAAGATGCAAAGCTAAAGGAGTACATAGAGAAGCATGGAACTGGAGGAAATTGGATTGCCCTCCCACAAAGAGCTGGTCTGAAAAGATGTGGGAAAAGCTGTAGACTAAGATGGCTAAACTACCTCAGACCTAACATCAAACACGGGGAGTTCTCTGATGATGAAGATAGAATAATCTGCGGCCTCTATGCTAGCATTGGAAGCAGGTGGTCAATAATAGCAGCTCAGTTGCCGGGAAGGACTGACAATGATATCAAGAACTACTGGAACACCAAGCTCAAGAAAAAGATGATGGCCATGAACCCTTCAGTATCCCAAGCTACCCTTTCATCAGTCATCCAAAATTCAACACCATCTTCATCTTCCTCCTCATCATCTTCATCATTATCATTCAGAGACAGCACTAACTCCTACTGCCACCACCCTCACGGCTCATTCACAGGCTATGATCAGTCCATCTCCTACTCGTCCATTAGTCTCCTGAGTGGAGGTCACTCTTCTTGTGCTTCTGCCAATTCCTTCTTTCAACCCCAGGAAAGTTTGATTCAGAATTACGGAGGGAGAGATCAGAGGGTGTTCATGTTTGGGGGTGAAGTGGCCAGTTGCAGCTCTTCTGATGGGAGCTGCAATAACAATAACATTAACAACCAGATGAGTCATGCGAAAGAATCAGCAGAAGTTGGATACAGTGGAGATCATGGGAATTTCGTCGAACAGATGATGGGCGTGCATAATAGTAATTACGGTTACCTGCAGAGTGGGACGGAGATGGAAGAAACTCACGAGCTGATGAGGGGGTGTGATGGGGGTTGGTGGACACAGAAACAAAGTGGACTGTGGGAAGAGAATCCAGCGTTAGATTATGAGATTGAAGAAATTAAACAGCTAATGAGCAGTACTAGCAGCTGCAATAACTCCTTGTTTGATGAAAACAAGACACAGAAAAGGGCCGTGCACTATTACTGA 1026 0.4561 MGRAPCCDKANVKKGPWSPEEDAKLKEYIEKHGTGGNWIALPQRAGLKRCGKSCRLRWLNYLRPNIKHGEFSDDEDRIICGLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKMMAMNPSVSQATLSSVIQNSTPSSSSSSSSSSLSFRDSTNSYCHHPHGSFTGYDQSISYSSISLLSGGHSSCASANSFFQPQESLIQNYGGRDQRVFMFGGEVASCSSSDGSCNNNNINNQMSHAKESAEVGYSGDHGNFVEQMMGVHNSNYGYLQSGTEMEETHELMRGCDGGWWTQKQSGLWEENPALDYEIEEIKQLMSSTSSCNNSLFDENKTQKRAVHYY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0860 341 Gene3D - 69 143 - -
Bisa03g0860 341 PANTHER OS09G0431300 PROTEIN 1 315 - -
Bisa03g0860 341 CDD SANT 16 62 IPR001005 -
Bisa03g0860 341 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bisa03g0860 341 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bisa03g0860 341 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bisa03g0860 341 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bisa03g0860 341 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa03g0860 341 Gene3D - 7 68 - -
Bisa03g0860 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Bisa03g0860 341 SMART sant 67 115 IPR001005 -
Bisa03g0860 341 SMART sant 13 64 IPR001005 -
Bisa03g0860 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Bisa03g0860 341 FunFam Transcription factor RAX3 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0860 Bisa-ChrBisa03 11450616 11451927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0860 1 118 MYB Transcription Factor Family AT5G57620 88.136 4.82e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g0860 Myb_DNA-binding 4.8e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0860 03 11450616 11451927 Bisa07g2235 07 51367563 51368688 CCT