Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0859 ATGTCACAAGATTCTGAGGAGATAAAGACGATTGAGCAGTGGAGATGGTCCGAAATGCAAGGCCTTGAGCTCGTGCCTCCTTCTCCTACTTCCGACCCGACAGCGGAAAACAGAGACCCCAAGGCAGAGGAGCCTCCTCCAGAGAAAGCCACCAAAGCAGATAGAAACGACATGGAGGGCTCTGAATCCAACAAAGATGGCGCAGAGAAGCCTGGGAGCGTTCCCCCTGTGGGGTTGGGCGAGCTTTTCAGATTCGCCGATGGGTTGGATTACATTCTGATGGGAATTGGAACGGCGGGAGCAATCGTACATGGGTGTTCCTTGCCTCTGTTTCTTCGGTTCTTCGCGGATCTTGTGAACTCTTTTGGGTCCAATGCCAATGATGTGAACAAGATGACCCAGGAAGTCGTGAAGTACGCATTTTACTTCTTGGTGGTGGGTGCTGCTATATGGGCATCCTCGTGGGCAGAAATTTCATGCTGGATGTGGACTGGAGAGCGGCAATCGACGAAAATGAGGATCAAGTACCTCGAAGCTGCCCTGAACCAAGACATTCAGTACTTCGATACCGAGGTTCGAACATCCGACGTTGTCTTCGCCATTAATACTGATGCTGTGATGGTCCAAGACGCCATTAGCGAGAAGCTGGGTAATTTCATTCACTACATGGCCACATTCGTCTCTGGATTTGTGGTGGGTTTCACGGCCGTTTGGCAATTAGCTCTAGTCACCCTTGCCGTCGTCCCAATGATAGCTGTGATCGGAGGCATTCACACCACCACGTTGGCTAAGCTCTCCGGCAAAAGCCAGGAAGCTCTCTCTCAAGCTGGCAACACTGTCGAGCAGAATGTTGCGCAAATTCGGGTGGTATTGGCATTCGTTGGGGAGAACCGAGCATTACAAGCATACTCGTCGGCGTTGAAAGTAGCACAGAAGATTGGCTACAAAACTGGTTTCGCAAAAGGAATGGGATTGGGTGCCACTTACTTTGTCGTTTTCTGCTGTTATGCTCTTCTGTTATGGTACGGAGGCTACCTCGTTAGGCACCACTACACCAATGGAGGACTTGCCATTGCCACCATGTTTGCTGTCATGATAGGTGGACTGGCTTTGGGTCAGTCCGCGCCAAGCATGGCTGCGTTTACAAAGGCTAGAGTTGCTGCTGCAAAAATTTTCCGCATAGTTGATCACAAGCCAGGTATAGACAGAAACAGTGAATCAGGGTTGGAGTTAGAGTCAGTGACAGGACTAGTGGAGCTCAAAAATGTAGAATTTTCGTACCCATCAAGGCCAGAGGTTCGGATCCTCATTGATTTCTCTCTAGTTGTGCCTGCCGGGAAGACCATAGCTTTAGTTGGGAGTAGTGGCTCCGGCAAGAGCACCGTCGTCTCTCTCATCGAGCGATTCTATGACCCAACTTGTGGGCAAGTTCTGCTCGATGGGCATGACATTAAAACGTTGAGGCTTAGATGGCTGAGGCAGCAAATAGGACTAGTGAGCCAAGAGCCTGCTTTATTTGCTACCACAATTAGAGAAAATATACTGTTGGGTAGGCCTGATGCAGACCAGGTTGAGATTGAAGAAGCTGCGAGGGTAGCTAATGCTCATTCATTCATCATCAAGCTTCCAGAAGGCTATGATACTCAGGTGGGAGAGAGAGGGCTGCAGCTTTCAGGAGGGCAAAAGCAGAGGATAGCAATAGCAAGGGCTATGCTGAAAAACCCAGCAATTCTTCTGCTGGATGAAGCAACAAGTGCATTGGACTCTGAGTCAGAAAAGCTGGTTCAAGAAGCCCTTGACCGGTTCATGATTGGAAGAACAACTCTTGTAATCGCCCATCGCCTCTCCACTATTCGCAAAGCTGACCTTGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAACTTTTTGCTAGAGGTGAAGGTGGAGTCTATGCCAAGCTTATCCGGATGCAGGAAGCAGCTCATGAAACTGCTATGAATAATGCAAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAATTCTGTTAGCTCACCAATAATTACTCGGAATTCTTCTTATGGCCGGTCACCATACTCACGCAGGCTATCTGACTTCTCCACTTCTGACTTCAGTCTGTCCCTTGATGCACCACATCCAAATTACAGGCTTGAAAAGCTTGCCTTCAAGGACCAAGCTAGTTCCTTCTGGCGCCTTGCAAAAATGAACTCTCCTGAATGGTTATATGCCTTAATCGGTTCTATAGGCTCTGTTGTTTGCGGATCCCTTAGTGCATTCTTTGCTTATGTCCTCAGTGCAGTCCTCAGTGTCTACTACAATCCAGACCACAAATTCATGATTCAACAAATAGAGAAGTACTGCTACTTGTTGATTGGCCTTTCGTCAGCTGCACTTCTCTTCAATACACTGCAGCATTTCTTCTGGGATATTGTGGGAGAAAATCTTACAAAGCGAGTAAGGGAGAAAATGCTGACTGCCGTGCTAAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAACGAGAGTGCTAGGATTGCAGCAAGGCTTGCTCTTGATGCAAATAATGTCAGATCAGCTATTGGAGATCGAATCTCTGTGATTGTCCAGAACACTGCACTTATGCTAGTTGCATGTACTGCAGGATTTGTTTTGCAGTGGCGCCTAGCCCTTGTTCTCGTAGCCGTCTTCCCTGTTGTTGTTGCTGCCACTGTTTTGCAGAAAATGTTCATGAGTGGCTTCTCTGGAGACCTGGAAGCTGCTCATGCCAAGGCCACTCAACTAGCAGGAGAGGCTATAGCGAATATGAGAACTGTTGCTGCCTTCAACTCGGAAACAAAAATTGTTGGTCTTTTCACCTCCAACCTTGAAACTCCACTCCGCCGATGCTTTTGGAAGGGACAGATCTCAGGCAGTGGATTTGGGATAGCTCAGTTTGCACTTTATGGTTCTTATGCACTTGGTCTGTGGTATGCCTCTTGGCTTGTGAAGCACGGAATCTCTGACTTCTCCAAAACAATCAGAGTTTTCATGGTCCTCATGGTCTCCGCCAATGGTGCTGCTGAAACTCTAACTCTGGCTCCCGACTTCATCAAGGGAGGTCGAGCCATGAAGTCAGTCTTCAATCTCCTCGACCGAAGAACTGAAATTGAGCCAGATGACCTAGATGCTACTCCTGCTTCTGATCGTATTCGTGGAGAAGTTGAACTTAAACATGTTGACTTCTCATATCCCACTCGCCCAGATATGCCAGTATTTCGTGACCTTAGTCTTCGGGCTAGAGCCGGTAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTGTACAGAGATTCTATGATCCAACATCCGGGCGAGTAATGATTGATGGAAAGGACATTAGAAAGTACAATCTCAAGTCCCTAAGGAAGCACATTGCTGTGGTGCCTCAAGAGCCCTGCTTATTTGCTGCTACTATATATGAAAACATTGCATATGGGCATGATTCAGCGAGTGAAGCCGAGATAATCGAAGCAGCAACACTTGCCAATGCCCACAAGTTCATATCAGCATTGCCAGATGGATACAAGACATTTGCTGGGGAGAGAGGAGTTCAACTATCCGGAGGGCAAAAGCAGAGGATAGCAATTGCTCGGGCTTTTGTGAGGAAGGCAGAGCTTATGCTTCTTGATGAAGCAACAAGTGCACTCGATGCTGAGTCTGAGAGGTCCGTTCAGGAGGCGTTGGACCGTGCATGCTCTGGAAAGACAACTATCATTGTTGCTCACAGGCTATCAACAATTAGGAACGCCAATCTCATTGCTGTGATTGATGATGGAAAAGTGGCAGAGCAAGGATCACACTCGCAGTTGCTGAAGAATTTCCCAGATGGGATCTATGCCCGAATGATCCAGTTACAGAGGTTTACACACAGCCAAGCAGTTGGGATGGCCTCAGGCTCAAGTTCTTCAGCGAGACCAAAAGATGATGAAAGAGAAAGCTAG 4020 0.4771 MSQDSEEIKTIEQWRWSEMQGLELVPPSPTSDPTAENRDPKAEEPPPEKATKADRNDMEGSESNKDGAEKPGSVPPVGLGELFRFADGLDYILMGIGTAGAIVHGCSLPLFLRFFADLVNSFGSNANDVNKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSGKSQEALSQAGNTVEQNVAQIRVVLAFVGENRALQAYSSALKVAQKIGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLALGQSAPSMAAFTKARVAAAKIFRIVDHKPGIDRNSESGLELESVTGLVELKNVEFSYPSRPEVRILIDFSLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTCGQVLLDGHDIKTLRLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFARGEGGVYAKLIRMQEAAHETAMNNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDAPHPNYRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHKFMIQQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMSGFSGDLEAAHAKATQLAGEAIANMRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYGSYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFNLLDRRTEIEPDDLDATPASDRIRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRKHIAVVPQEPCLFAATIYENIAYGHDSASEAEIIEAATLANAHKFISALPDGYKTFAGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNFPDGIYARMIQLQRFTHSQAVGMASGSSSSARPKDDERES 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0859 1339 Pfam ABC transporter 438 585 IPR003439 GO:0005524
Bisa03g0859 1339 Gene3D - 1062 1313 IPR027417 -
Bisa03g0859 1339 Gene3D - 408 658 IPR027417 -
Bisa03g0859 1339 SMART AAA_5 1100 1292 IPR003593 GO:0016887
Bisa03g0859 1339 SMART AAA_5 445 631 IPR003593 GO:0016887
Bisa03g0859 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 750 1037 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0859 1339 Pfam ABC transporter 1092 1240 IPR003439 GO:0005524
Bisa03g0859 1339 Pfam ABC transporter transmembrane region 751 1020 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0859 1339 Pfam ABC transporter transmembrane region 95 367 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0859 1339 Gene3D ABC transporter type 1, transmembrane domain 1039 1317 IPR036640 GO:0005524|GO:0016020
Bisa03g0859 1339 MobiDBLite consensus disorder prediction 664 696 - -
Bisa03g0859 1339 CDD ABC_6TM_Pgp_ABCB1_D2_like 739 1055 - -
Bisa03g0859 1339 SUPERFAMILY ABC transporter transmembrane region 737 1057 IPR036640 GO:0005524|GO:0016020
Bisa03g0859 1339 CDD ABC_6TM_Pgp_ABCB1_D1_like 94 391 - -
Bisa03g0859 1339 FunFam ABC transporter B family member 1 1063 1313 - -
Bisa03g0859 1339 PANTHER ABC TRANSPORTER B FAMILY 52 761 IPR039421 -
Bisa03g0859 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1073 1309 IPR003439 GO:0005524
Bisa03g0859 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 96 383 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g0859 1339 ProSitePatterns ABC transporters family signature. 1212 1226 IPR017871 GO:0005524|GO:0016887
Bisa03g0859 1339 MobiDBLite consensus disorder prediction 1320 1339 - -
Bisa03g0859 1339 ProSitePatterns ABC transporters family signature. 557 571 IPR017871 GO:0005524|GO:0016887
Bisa03g0859 1339 FunFam ABC transporter B family member 1 408 658 - -
Bisa03g0859 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 418 654 IPR003439 GO:0005524
Bisa03g0859 1339 MobiDBLite consensus disorder prediction 36 66 - -
Bisa03g0859 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1067 1312 IPR027417 -
Bisa03g0859 1339 Gene3D ABC transporter type 1, transmembrane domain 730 1038 IPR036640 GO:0005524|GO:0016020
Bisa03g0859 1339 SUPERFAMILY ABC transporter transmembrane region 82 402 IPR036640 GO:0005524|GO:0016020
Bisa03g0859 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 409 657 IPR027417 -
Bisa03g0859 1339 MobiDBLite consensus disorder prediction 1 75 - -
Bisa03g0859 1339 CDD ABC_MTABC3_MDL1_MDL2 1073 1312 - -
Bisa03g0859 1339 FunFam ABC transporter B family member 1 729 1038 - -
Bisa03g0859 1339 Gene3D ABC transporter type 1, transmembrane domain 81 670 IPR036640 GO:0005524|GO:0016020
Bisa03g0859 1339 CDD ABC_MTABC3_MDL1_MDL2 418 657 - -
Bisa03g0859 1339 FunFam ABC transporter B family member 1 81 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0859 Bisa-ChrBisa03 11399233 11404889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0859 70 1336 Calmodulin-binding Proteins AT2G36910 88.249 0.0 2289