Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0829 ATGTTGTGGAAGAATTTTAATATGGCGAATGTGCCGGAGAATTATCAACAGCTGAGATTGAATTTTATTTCACTGGTGCTTGTGAGCGGATTCGTCGCGGGAATGGGTGATTCTGAAATTGGTGCTGGCCCAGTGCCAAGAGTGAGGAGTGCGCATAATGACATCCGTTTCCACTTCTTATTCTATTGTCATGGGATATTATTTGTGCAACGCTTTACTCTTGGCATAGTTTTTACTAACAGAAGAGCAGTCCATCCTTTGAGCCTCTTGGATCTTGGTCTTGTTATCAAGTCAGGCGGGGATATGAAGCAGAGTTCCAGTAGAGCGTTATGGCATTTGGTAGATCAAGTACTGAAATTCTTGGTTATACGTGGATACAGGTTTCAAAATGATCTAGAGGCAGACATATCAACAGCGAGCATAGAAAGTCCCATGTCGATGCAGGGCCATAAGATGAAGACAAAAGACTTGTTGCGGGGAAAAGAAATTTCCAGGGTGTTTTCTGAGGATTATGATGCCTCAAAGAAGATGATATTCGACCCCAGGGGACCAAGAGTAAACAGATGGAACAAAATGTTCTTAGTGGCATGTTTGATTTCACTATTTGTGGATCCCCTCTTCTTCTACTTGCCTGAGGCTAAGAAAGACAATTGCATCGCTACATCTGCTACCCTCGAAGTCTCCCTCACCACAGTTCGGTCCATGGTTGATGCATTTTACATCATTCAGATATTTTTTCGGTTCCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGGAAGAGGAGAGCTTGTTATAGACCCTTCAAAGATTGCATCAAGGTACCTCCAGAAGGACCTCTGGCTTGATCTTGTGGCTGCCCTCCCTCTTCCACAGGTGTTAATCTTGGCCGTAATTCCAAATCTAAGAGGGTCACAAATGGTTGCTTCGAGGCAGATTCTGCGCCTTGTTATCATTTCCCAGTACTTGTTGAGGTTATATCTTATCTTCCCTCTCTCATCTGAGATAGTGAAGGCAAATGGGGTAATGATGGAAAAGGCTTGGGCTGGAGCAGCATATAATCTGATGCTCTATATGCTGGCAAGTCATGTCTTAGGGGCCTCCTGGTACCTATTGGCAATTGAAAGGCAGGACGAGTGTTTGAAGAAAGCTTGTAGTCTGGAGTTCCCAAATTGCCGGTATCGTTATCTTGATTGCCAAAACGTAAGAGAACCAGATAGAGTAGCTTGGTTCAGATCAAGCAATATATCAGGCCTGTGTGATAAGAGCAGTGATTTCTTTCAGTTTGGTATTTTTGCTGATGCTCTCACTTTGGAAATGATGAACGCTAAGTTCTTAAGCCGATACTATTACTGCCTTTGGTGGGGACTACGGAATCTCAGCTCTATTGGACAGAATCTCCTTACAAGCACCCATGTCGCAGAGATAATTTTTGCCGTGATTATTGCAATTCTTGGCTTAGTGCTTTTTGCCCTGATTATAGGCAATATGCAGACGTACCTGCAGTCAACGACTTTGCGACTAGAAGAATGGAGAATAAGAAGGACAGATACAGAACGATGGATGCATCACAGGCAGCTACCTCGTTACCTGAAACAAAGCGTGCGACGCTACGAGCAATTCAGATGGGTTGCTACTCGCGGAGTTGACGAGGAAACCATTCTTCGAGACCTTCCCGTCGACATCAGACGCGACATCAAACGCCACCTCTGTCTCAACCTCGTCCGGCAAGTACCACTGTTTGATCAAATGGAGGAGAGGGTGCTAGGCGCAATATGTGAAAGGCTGAAGCCTTCTCTGTGTATTCCAGGGACTCGCCTAGTTCGCGAGGGAGATCCAGTGAATGAAATGCTCTTCATCGTTCGGGGTCGGTTAGATTCATGCACGACCAATGGCGGGCGAACCGGGTTCTTTAATTGCTGCAGAATCGGGCCGGGTGATTTCTGTGGGGAGGAGCTATTGCCTTGGGCCTTAGACCCACGTCCAAGTGTGGTCCTTCCCTCTTCGACTCGCACGGTGAAAGCCCTAACTGAAGTGGAAGCTTTTGCCCTCATAGCGGAAGACATAAAATTTGTGGCAGCCCAATTTAGGAGGCTACACAGCAAGCAACTGAGGCACACGTTTAGGTCTCACTCGCATCAATGGAGGACGTGGGCTGCGTGTTTCATACAATCTGCCTGGTTTAGGTATAAGAGGAGGAAGGAGGCGAGTGAGCTGAACAAGAAGGAGTGTGCGAAGGTGGATGCATATGAAACTGCGGTGGGATGTTTCTCTGGGCCTTTGCACTTGCAGCCACAAGATGGGTCGAGTGGGGGGAAATTGGCAAGCAGCCCAAGGAAAGGTGGAAGCTTGAGATATGGTTCCGAGCTTGACTATCTGGGTCCGTTGATGAAGCCCCTTGAACCTGACTTCAGTGTTGAAGATGGATGA 2433 0.4665 MLWKNFNMANVPENYQQLRLNFISLVLVSGFVAGMGDSEIGAGPVPRVRSAHNDIRFHFLFYCHGILFVQRFTLGIVFTNRRAVHPLSLLDLGLVIKSGGDMKQSSSRALWHLVDQVLKFLVIRGYRFQNDLEADISTASIESPMSMQGHKMKTKDLLRGKEISRVFSEDYDASKKMIFDPRGPRVNRWNKMFLVACLISLFVDPLFFYLPEAKKDNCIATSATLEVSLTTVRSMVDAFYIIQIFFRFQTAYVAPSSRVFGRGELVIDPSKIASRYLQKDLWLDLVAALPLPQVLILAVIPNLRGSQMVASRQILRLVIISQYLLRLYLIFPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGASWYLLAIERQDECLKKACSLEFPNCRYRYLDCQNVREPDRVAWFRSSNISGLCDKSSDFFQFGIFADALTLEMMNAKFLSRYYYCLWWGLRNLSSIGQNLLTSTHVAEIIFAVIIAILGLVLFALIIGNMQTYLQSTTLRLEEWRIRRTDTERWMHHRQLPRYLKQSVRRYEQFRWVATRGVDEETILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMEERVLGAICERLKPSLCIPGTRLVREGDPVNEMLFIVRGRLDSCTTNGGRTGFFNCCRIGPGDFCGEELLPWALDPRPSVVLPSSTRTVKALTEVEAFALIAEDIKFVAAQFRRLHSKQLRHTFRSHSHQWRTWAACFIQSAWFRYKRRKEASELNKKECAKVDAYETAVGCFSGPLHLQPQDGSSGGKLASSPRKGGSLRYGSELDYLGPLMKPLEPDFSVEDG 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0829 810 SUPERFAMILY Voltage-gated potassium channels 180 503 - -
Bisa03g0829 810 ProSiteProfiles cAMP/cGMP binding motif profile. 581 666 IPR000595 -
Bisa03g0829 810 Gene3D Jelly Rolls 579 699 IPR014710 -
Bisa03g0829 810 SUPERFAMILY cAMP-binding domain-like 511 702 IPR018490 -
Bisa03g0829 810 Gene3D - 192 505 - -
Bisa03g0829 810 FunFam Cyclic nucleotide-gated ion channel 1 579 697 - -
Bisa03g0829 810 PRINTS EAG/ELK/ERG potassium channel family signature 361 371 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0829 810 PRINTS EAG/ELK/ERG potassium channel family signature 476 487 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0829 810 PRINTS EAG/ELK/ERG potassium channel family signature 450 467 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0829 810 PRINTS EAG/ELK/ERG potassium channel family signature 544 551 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0829 810 PRINTS EAG/ELK/ERG potassium channel family signature 244 253 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0829 810 PRINTS EAG/ELK/ERG potassium channel family signature 494 503 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0829 810 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 168 750 - -
Bisa03g0829 810 Gene3D Helix hairpin bin 509 572 - -
Bisa03g0829 810 CDD CAP_ED 581 710 IPR000595 -
Bisa03g0829 810 SMART cnmp_10 581 712 IPR000595 -
Bisa03g0829 810 Pfam Ion transport protein 189 508 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0829 Bisa-ChrBisa03 11003035 11008342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0829 152 808 Ion Channels AT2G28260 63.470 0.0 877