Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0821 ATGGCCAAGGACCTCGAGGGAGCTGCTCCTCACAAGGACTACCATGATCCTCCCCCTGCCCCTCTCTTCGACGCCCAGGAGCTCTACAAGTGGTCCTTTCACAGGGCTCTCATTGCTGAGTTCGTCGCCACCCTCTTGTTCTTGTACATTACTGTCTTGACTGTTATTGGTTACAAGAGCCAGATCGATCCCGCTGCCCCCACCCATGGAGGTGATTGCGACGGCGTTGGCATTCTCGGCATCGCCTGGGCTTTTGGTGGCATGATTTTCGTCCTCGTCTACTGCACCGCCGGCATTTCTGGAGGGCACATAAACCCGGCTGTGACGTTCGGGCTGTTCCTGGCTAGGAAGGTGTCGTTGCTAAGAGCGATTATGTACATGGTGGCTCAGTGCTTGGGGGCCATATGTGGGTGTGGGTTGGTGAAGGCTTTCCAGAAGGCCTACTACGACAGGTACGGTGGGGGTGCCAACGAGTTGGCTGTTGGCTACAGCAAAGGCACTGGTTTGGGGGCTGAGATTATTGGTACCTTCGTTCTTGTCTACACCGTCTTCTCTGCTACAGATCCCAAGAGAAATGCCAGGGATTCTCATGTTCCCGTGTTGGCTCCACTCCCAATAGGATTTGCGGTTTTCATGGTTCACCTAGCCACCATCCCCATCACCGGCACCGGCATCAACCCGGCCCGAAGCTTCGGGGCTGCTGTTGTTTACCACAATGAGAAGGCATGGGACGACCAGTGGATCTTCTGGGTCGGACCCTTCGTCGGTGCCGCCATTGCTGCAATTTACCACCAATTTGTGCTGAGAGCACAGGCGGCCAAAGCTCTGAGCTCTTTCAGGAGCTCCTCCCATTTATAA 858 0.5536 MAKDLEGAAPHKDYHDPPPAPLFDAQELYKWSFHRALIAEFVATLLFLYITVLTVIGYKSQIDPAAPTHGGDCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRAIMYMVAQCLGAICGCGLVKAFQKAYYDRYGGGANELAVGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVVYHNEKAWDDQWIFWVGPFVGAAIAAIYHQFVLRAQAAKALSSFRSSSHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0821 285 SUPERFAMILY Aquaporin-like 26 269 IPR023271 -
Bisa03g0821 285 FunFam Probable aquaporin PIP1-2 20 283 - -
Bisa03g0821 285 Pfam Major intrinsic protein 28 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 CDD MIP 35 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 NCBIfam MIP family channel protein 39 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 Gene3D Glycerol uptake facilitator protein. 20 285 IPR023271 -
Bisa03g0821 285 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Bisa03g0821 285 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa03g0821 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 280 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0821 Bisa-ChrBisa03 10876473 10877650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0821 1 285 Major Intrinsic Protein MIP AT2G37170 80.836 1.45e-170 473