Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0815 ATGGGTAACATAGGAAGCAGCGGCGTTGACAGCCGCCGGAGAAGCAATAGCAGACGGGGTCATCCGCCGCCGCCGTCACCGGTAACGCCGCAGTCTGAAATCGCGGCCAATCGGTTTGTGTATCCTGCATCTACCCCTTACACATCACAATACCCAAACTCAAATCCTTCCCCGTATCTTCAGTACCCAGGTTACTATCCCGCTGCGCCACAAGCTATGCCGGTGCCTTTGCCCGCTCCGATCGATCACCACCACCGTATGGGGCCTCGTCCACACATGAACCCGTCATGGATGGGTGGACCTTACCATTGTGGACCTGTTATGCCTCCCCCTGCGCCATATGTAGAGCATCAGAAGGCAGTTACCGTGAGGAATGACGTTAATGTCAAGAAGGAGACTCTAAGGATTGAACGAGATGACGAAAATCCTGGGCGCTTCCTCGTGGCATTCACATTTGATGCCACTGTTGCTGGGAGCATCACCATAATTTTCTTTGTGAAAGAAGATGACAGCGGCATCCTTACACCAACGAAGGAATATATTCTTCCCCCTGTGACCGTAAGTTTCGAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGTTGGAACTGGTATTGACTTTTCATTCTTTGAGGAGTCAGAATTATTGAAAGTGGGTGACATGGATGTCTACCCTCTAGCAGTGAGGGCAGAAGCATCCTATGATAAACAAGATGGATCAAATGAAAGTCTAACACCTAAAAGCAGAAACTCTCAGATAACTCAAGCAGTGTTTGAGAAGGAGAAAGGAGAATTCCGGGCCAAGGTAGCCAAGCAGATCTTGTGGGTAAATGAAATGAGGTATGAACTGCAAGAGATATACGGCATTGGAAATTCTGTGGAGAGTAACTTGGATGCAAATGATTCTGGAAAGGACTGTGTCATCTGCCTCTCAGAGCCACGGGACACAACTGTTCTTCCCTGCCGACACATGTGCATGTGTAGCGAATGTGCAAAGGTTTTGAGGTTCCAGACGAATAGATGCCCAATTTGCAGACAACCAGTTGAGAGGCTTTTGGAGATAAAGGTCAATAATGGTAACAGCACTGAGGAATGA 1095 0.4868 MGNIGSSGVDSRRRSNSRRGHPPPPSPVTPQSEIAANRFVYPASTPYTSQYPNSNPSPYLQYPGYYPAAPQAMPVPLPAPIDHHHRMGPRPHMNPSWMGGPYHCGPVMPPPAPYVEHQKAVTVRNDVNVKKETLRIERDDENPGRFLVAFTFDATVAGSITIIFFVKEDDSGILTPTKEYILPPVTVSFEQGLGQKFRQPVGTGIDFSFFEESELLKVGDMDVYPLAVRAEASYDKQDGSNESLTPKSRNSQITQAVFEKEKGEFRAKVAKQILWVNEMRYELQEIYGIGNSVESNLDANDSGKDCVICLSEPRDTTVLPCRHMCMCSECAKVLRFQTNRCPICRQPVERLLEIKVNNGNSTEE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0815 364 Pfam Zinc finger, C3HC4 type (RING finger) 304 350 - -
Bisa03g0815 364 FunFam probable E3 ubiquitin-protein ligase LOG2 290 355 - -
Bisa03g0815 364 SMART ring_2 306 344 IPR001841 -
Bisa03g0815 364 SUPERFAMILY RING/U-box 305 351 - -
Bisa03g0815 364 PANTHER MAHOGUNIN 1 359 IPR045194 GO:0061630
Bisa03g0815 364 MobiDBLite consensus disorder prediction 1 34 - -
Bisa03g0815 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 355 IPR013083 -
Bisa03g0815 364 ProSiteProfiles Zinc finger RING-type profile. 306 345 IPR001841 -
Bisa03g0815 364 CDD mRING-HC-C3HC5_MGRN1-like 304 345 IPR045195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0815 Bisa-ChrBisa03 10818508 10821534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0815 103 325 C3H Transcription Factor Family AT3G09770 63.158 1.68e-96 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0815 03 10818508 10821534 Bisa03g0815 03 10818508 10821534 ECH