Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0811 ATGCAGAGTGCAGAATGCAGAGTGCAGAGTCCCCACAGAGACCACAGTCTTATTTCGTGGGTCCCACACGATGACACCCAGACGGACAGAGCTCGCTATTTCACACAATTCCACGAATATTGTGGGTGTGGGGTGGTGTCTGTATTTGTGTGTCTTTGTGGAGAGTGGTGGCCCATCGATCAAAATCTATGGCTGACCGTGATTGAGTTTGCTGTTCCCTTCTGCTCACCTCACCTCACCTTACCCTCCCCTTCCAATATACTCTTCCCTTTCTTTTCTAATATGCAAATGATATCTGGTGACCCTTTTTCCTTATCCTCTTCCATCCCAGGCTTCCCTTCTGAACCCACCCCAAACCCTAACCCTAAACCTAATCCCCCTCCCCTCCCTAAGAAGAAGCGAAATCTACCAGGTACACCAGATCCAGATGCGGAAGTCATCGCTCTTTCGCCCAAGTCTCTCATGGCGACCAACAGATTCATCTGTGAAATATGCAACAAGGGGTTCCAGAGAGACCAAAACCTGCAGCTTCACCGGAGGGGACACAACCTTCCGTGGAAGCTACGACAAAGGTCGAACAAGGAGGTCCGGAAGAAGGTGTACATCTGCCCGGAGAAGACCTGCGTCCACCACGACCCCTCCAGGGCGCTCGGAGACCTAACCGGCATCAAGAAGCATTACAGCAGAAAACACGGCGAGAAGAAGTGGAAGTGCGACAAGTGTTCGAAGAAATACGCGGTCCAATCCGATTGGAAAGCCCACACCAAAACCTGTGGCACTAGAGAGTATAAGTGCGACTGTGGTACCCTCTTCTCTAGGAAGGACAGTTTCATAACCCACAGAGCTTTCTGCGATGCCTTAACCGAAGAGAGTGCGAGAATGACCTCCGTTGATACTACAAATTTGAATTTCAAGAATGAAGAGAATGTGATGAACTCTCACTCTCACTCTCAGTCTCAGGCATTTGGGATTTCACAATTTGGTGCAGCACATGGATTTCGTTCAGACTTTAATGGAATGGGAATGGGCATGGGTGGTGGTGGAGAGCAACATAGGCCAAGCTTATCGCTGTGGTTGAACCAGCTGGGAAATCAACAGATTAATAATAGTCCTCTTGATGTTGGACTCAACTCTGGTCTCTATGTGTCATCCTCAAGTTCTTCAGGTTTGCCTGAGATGAATGTGCAAATGCCTCACCCTAATAATAATGCCTTTGGCTCATCTTTTGGAATGCCAGTTTCCAACTCAACCAACAACGCTAGTCTTTCCCTCTCGTCACTTCCTCTTGCGAAAAAGGGAGAAAGTAGTAGTGGAACTGCAAACTTGGCGTCTATTTATTCAGAGGCTCAAAACAATCACTCAAATTCAAAGTCGGCTTCTCCTATGTCTGCCACTGCACTTCTACAGAAGGCAGCTCAGATGGGTTCTACCAGGAGCACCAACCCCTCAATCTTCAGTGGCAGTTTTGGAGTGATGAGCTCGTCTTCTTCACAGACTACAGCAAGTCTCGAAAACAACGCTGACCAAAACCATAATAACGAACTGAACCAAGTGTTTCAGGGGATGAAGCAGCCCGAGAATTTTAGTTCAACTAGCAGTGGCGCTGCTATGCTGGGCAGCGGTAACTTCAGCTCTTTGACGCATTCTTCAAACAGTGGTCTTGATGAGCTTGTGTTGCAGCAACCCAATGCAAGACAAAATAATAATAAACAAGTGCAAATGAAGCTTCATCCTGATTCAACCTCTGGGGACCATGGCTACACCAGAGATTTTCTGGGCATGGGCGGAGGAGGAGGAGGTGGTGGTGGTGGTTGTCCTCCTCAATTTCTGCCTCATGAGCTCGCAAAGTTTGCTTCCATTGCCTCGCCCATGAGTCTGCCCCAATTCACTACTGGCACTACCACTCAGTGA 1911 0.484 MQSAECRVQSPHRDHSLISWVPHDDTQTDRARYFTQFHEYCGCGVVSVFVCLCGEWWPIDQNLWLTVIEFAVPFCSPHLTLPSPSNILFPFFSNMQMISGDPFSLSSSIPGFPSEPTPNPNPKPNPPPLPKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEESARMTSVDTTNLNFKNEENVMNSHSHSQSQAFGISQFGAAHGFRSDFNGMGMGMGGGGEQHRPSLSLWLNQLGNQQINNSPLDVGLNSGLYVSSSSSSGLPEMNVQMPHPNNNAFGSSFGMPVSNSTNNASLSLSSLPLAKKGESSSGTANLASIYSEAQNNHSNSKSASPMSATALLQKAAQMGSTRSTNPSIFSGSFGVMSSSSSQTTASLENNADQNHNNELNQVFQGMKQPENFSSTSSGAAMLGSGNFSSLTHSSNSGLDELVLQQPNARQNNNKQVQMKLHPDSTSGDHGYTRDFLGMGGGGGGGGGGCPPQFLPHELAKFASIASPMSLPQFTTGTTTQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0811 636 FunFam protein indeterminate-domain 5, chloroplastic-like 214 293 - -
Bisa03g0811 636 MobiDBLite consensus disorder prediction 113 135 - -
Bisa03g0811 636 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 182 IPR013087 -
Bisa03g0811 636 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 119 607 IPR031140 -
Bisa03g0811 636 FunFam protein indeterminate-domain 12-like 139 207 - -
Bisa03g0811 636 Gene3D Classic Zinc Finger 139 212 - -
Bisa03g0811 636 SMART c2h2final6 160 182 IPR013087 -
Bisa03g0811 636 SMART c2h2final6 236 256 IPR013087 -
Bisa03g0811 636 SMART c2h2final6 201 231 IPR013087 -
Bisa03g0811 636 MobiDBLite consensus disorder prediction 109 143 - -
Bisa03g0811 636 SUPERFAMILY beta-beta-alpha zinc fingers 159 256 IPR036236 -
Bisa03g0811 636 Gene3D Classic Zinc Finger 214 294 - -
Bisa03g0811 636 ProSitePatterns Zinc finger C2H2 type domain signature. 162 182 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0811 Bisa-ChrBisa03 10763892 10767021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0811 95 620 IDZ Gene Family AT5G03150 46.303 1.22e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0811 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0811 03 10763892 10767021 Bisa07g1759 07 44058812 44061761 CCT
Bisa03g0811 03 10763892 10767021 Bisa03g0811 03 10763892 10767021 ECH