Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0809 ATGAGTGTCATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTACGATAAATACGACGTCGATAAGCACAAGGACTCCAACATCTCCGGCGACGATGCGTTTGCTCGACTGTACGCCGTCGTTGAAGCCGACATCGAGGCCGCGCTTCAGAAAGCGGAAACCGCTTCCAAGGAGAAAAATAAGGCATCTGCGGTAGCCATCAATGCCGAGATTCGTCGTACCAAGGCTCGTTTGCTGGAGGAGGTGCCCAAATTGCAGAGACTGGCAGTAAAGAAGGTAAAGGGGCTTTCATCAGAAGAATTTGCCGCCCGTAATGATTTGGTTCTTGGACTGCTAGAGAGGATCCAAGCTATTCCAGATGGGGCCCCTGCTGCACCCAAAAAAACAGGAGGCTGGGCATCTTCTGCTTCACGTCCTGAAATTAAGTTTGATTCAGACGGGCGATTTGACAGTGAATACTTCCAACAAACTGAGGAAACAAGTCAATTCAGGCAGGAGTTTGAAATGCGTAGAATGAAGCAGGATCAAGGTTTAGACATGATATCAGAAGGCTTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAGTTAGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAAGCATCCTCTGACCTAAAGAATACTAATGTCAGACTTAGAGACACGGTGAACCAGCTTCGATCCAGTCGAAATTTCTGTATTGATATTGTATTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAAGTAA 786 0.4491 MSVIDILTRVDSICKKYDKYDVDKHKDSNISGDDAFARLYAVVEADIEAALQKAETASKEKNKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSEEFAARNDLVLGLLERIQAIPDGAPAAPKKTGGWASSASRPEIKFDSDGRFDSEYFQQTEETSQFRQEFEMRRMKQDQGLDMISEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLRDTVNQLRSSRNFCIDIVLLIIILGIAAYLYK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0809 261 Coils Coil 40 67 - -
Bisa03g0809 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Bisa03g0809 261 Pfam SNARE domain 207 256 IPR000727 -
Bisa03g0809 261 Gene3D - 170 231 - -
Bisa03g0809 261 SMART tSNARE_6 166 232 IPR000727 -
Bisa03g0809 261 CDD SNARE_Qc 175 230 - -
Bisa03g0809 261 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bisa03g0809 261 PANTHER SYNTAXIN 47 252 IPR045242 -
Bisa03g0809 261 SUPERFAMILY SNARE fusion complex 164 230 - -
Bisa03g0809 261 FunFam Putative syntaxin-71-like 170 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0809 Bisa-ChrBisa03 10725885 10727985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0809 1 260 SNARE and Associated Proteins AT3G09740 78.244 3.33e-155 431