Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0792 ATGTCAGTATTATTTTCCTCGGATCCACCCACCAATATTGAATCAATCTTATATGGGTCAGATGAAGCCCATTGGCCTTATGAAATATATATGGACCGACTCAGAATTGGGTCCTGTAGTTTCGGTTGTTCTCTGCGTTCGCCGCTGCTGCTCAAGCTTCTAAGACTTCGAACAGTACCAGAGGAGGACAACCAAGTCGCCGTCACCATGGGGAAGACAAGAGGTATGGGAGCTGCCCGCAAGTTGAGGTCCCACCGCAGGAGGCAAAGGTGGGCAGACAAGGCATACAAAAAATCTCACCTTGGTAATGAGTGGAAGAAGCCTTTTGCTGGATCATCCCATGCAAAGGGTATTGTTCTTGAAAAAATAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGTAAATGTGCCAGGGTTCAACTTATTAAAAATGGGAAGAAGATTGCTGCATTTGTTCCTAATGATGGTTGCTTAAATTACATAGAAGAGAATGACGAAGTCTTGATAGCTGGATTTGGACGAAAGGGTCATGCCGTCGGTGATATTCCTGGTGTCAGATTCAAGGTTGTGAAGGTCTCTGGTGTCTCACTGCTGGCTCTTTTCAAGGAGAAAAAGGAGAAGCCAAGGTCTTAA 636 0.456 MSVLFSSDPPTNIESILYGSDEAHWPYEIYMDRLRIGSCSFGCSLRSPLLLKLLRLRTVPEEDNQVAVTMGKTRGMGAARKLRSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0792 211 NCBIfam 30S ribosomal protein S12 75 210 IPR005680 GO:0003735|GO:0006412|GO:0015935
Bisa03g0792 211 FunFam 40S ribosomal protein S23 94 211 - -
Bisa03g0792 211 SUPERFAMILY Nucleic acid-binding proteins 89 209 IPR012340 -
Bisa03g0792 211 Gene3D - 94 211 IPR012340 -
Bisa03g0792 211 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 66 211 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa03g0792 211 ProSitePatterns Ribosomal protein S12 signature. 128 135 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa03g0792 211 Pfam Ribosomal protein S12/S23 100 210 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa03g0792 211 CDD Ribosomal_S23 95 208 IPR005680 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0792 Bisa-ChrBisa03 10493695 10498349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0792 70 211 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 95.070 4.80e-95 271