Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0788 ATGATCTGCGAAGACGTACAGAGCAGAGCAACTGAGAGGCATACACAAGAACGCAGCAAGAACTCAGAAGATCCGAAAGCAACAAGGAAGAAGAGAACGGAAAATTCGAAACGCAGCAACGATACTCGAAAATCCGATTCCACAGACTCCGTAATAGAAGAACAAGGCAAGATTTATATCTCCAGTGTCGTAGTTCGATCTGCCACCGCCATCCTCTCGCCGGAATGCTTGTCGCACCTCTTAGTTGTTGCTGTCCTTCACACTTTAATCGGCAGAAGATCAACCCGGAAACAGGAAGGGAAGCCGCCGTTTAGCACGCACGCAACGACTAAAGACGCTGGTGATGCCATCGGCGATGCTGCAGAACCCTTAGATGCCTCAGGAACGCTAAGACACGCTTCAGAAAGAAGAAACCAAAAGGAGCAAAGGCTGTATTTGTTGAATAAAACAAAACGAACGGTGCTGATAGGCCTTGTTCTCTCATCTCAATCGTCTCCTAACCCCTTTCTTCTCCAGCGTCCGATCCCTCTCCATTCTCACCGATCTTACGCTCGCGCCAAATACGAATTCCTCACATCCCCCCAGAACAGGATTCCGGCGGCGATGGCTGAAGCTCCGGCCAGTCCTGGCGGTGGCAGCCCCGAGAGCGGTGACCAGAGCCCCCGCTCTAATGTCCGAGAGCAGGACAGGTATCTGCCTATCGCCAATATCAGCCGGATCATGAAGAAGGGGCTTCCTGCTAATGGAAAAATCGCCAAGGATGCCAAGGAGACCGTGCAGGAATGCGTTTCCGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGAGAGAAGAGGAAGACGATAAACGGCGATGATTTACTTTGGGCCATGGCGACTCTAGGGTTTGAGGATTATATCGAGCCCCTGAAGATTTACCTGAGCAGATACAGGGAGATGGAGGGTGATACCAAGGGTTCAGCTAAGGGTGGAGAAATATCTGCTAAGAAAGATGTTCAACCAAGTCCTAATGCTCAGCTTGCTCATCAAGGTTCTTTCTCACAAGGTAACTATACAAATTCTCAGGTTCAACGTATGATGGTTCCCATGCAAGGCCCAGAATAG 1116 0.5 MICEDVQSRATERHTQERSKNSEDPKATRKKRTENSKRSNDTRKSDSTDSVIEEQGKIYISSVVVRSATAILSPECLSHLLVVAVLHTLIGRRSTRKQEGKPPFSTHATTKDAGDAIGDAAEPLDASGTLRHASERRNQKEQRLYLLNKTKRTVLIGLVLSSQSSPNPFLLQRPIPLHSHRSYARAKYEFLTSPQNRIPAAMAEAPASPGGGSPESGDQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKIYLSRYREMEGDTKGSAKGGEISAKKDVQPSPNAQLAHQGSFSQGNYTNSQVQRMMVPMQGPE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0788 371 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 219 354 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa03g0788 371 PRINTS CCAAT-binding transcription factor subunit A signature 259 277 - -
Bisa03g0788 371 PRINTS CCAAT-binding transcription factor subunit A signature 278 296 - -
Bisa03g0788 371 PRINTS CCAAT-binding transcription factor subunit A signature 297 315 - -
Bisa03g0788 371 MobiDBLite consensus disorder prediction 202 228 - -
Bisa03g0788 371 MobiDBLite consensus disorder prediction 93 138 - -
Bisa03g0788 371 MobiDBLite consensus disorder prediction 320 371 - -
Bisa03g0788 371 SUPERFAMILY Histone-fold 228 327 IPR009072 GO:0046982
Bisa03g0788 371 Gene3D Histone, subunit A 219 359 IPR009072 GO:0046982
Bisa03g0788 371 MobiDBLite consensus disorder prediction 336 364 - -
Bisa03g0788 371 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 231 295 IPR003958 -
Bisa03g0788 371 MobiDBLite consensus disorder prediction 1 50 - -
Bisa03g0788 371 MobiDBLite consensus disorder prediction 7 50 - -
Bisa03g0788 371 FunFam Nuclear transcription factor Y subunit B-3 220 344 - -
Bisa03g0788 371 ProSitePatterns NF-YB/HAP3 subunit signature. 262 278 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0788 Bisa-ChrBisa03 10463932 10468980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0788 218 371 CCAAT-HAP3 Transcription Factor Family AT3G53340 81.013 9.06e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa03g0788 CBFD_NFYB_HMF 1.3e-26 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0788 03 10463932 10468980 Bisa03g0788 03 10463932 10468980 ECH