Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0782 ATGTTGGATCTTAATCTCAACGTCGGTTCCTCTGATTCTGGATCAATTTCTGTCGATATGTCTCCCAAGAAGACTCTACCACAATCTGGTAGCCAAATGGATAGCTCTGGAAGCTTTGATTCTTCCGTCGTCAATGCCGATACCTCCACCAACACTTGTGACGACGATTCCTGCTCTTATGGCGATACCTTCGCTCATGACTTCGGAATACTAAAGAAGAGTGCTACAGATGATGGCACGAGCTCGAAAGCAGTTGAAATTCCCGTAGGCCAAAGCCAATATGGCAATAACCGGACCATCCAGCTATTCCCCGTCGCCGGAGCCCAAGTGGCTAATGTCACCGAATTGGGAATCGGTCAGCGGTTTCCCGGTTCGTCTTCAAGTAAGGGGTGGATGGATTTCTTGGGCAAGGAAGGGGGTGACGGTGGAAAGCCGGAGCAGAGCATGCTACCCTATCAGCAGCAGAGACCTCAAGTCAAGAAGAGCCGGCGGGGACCGAGGTCGCGGAGCTCGCAGTATCGCGGCGTTACATTTTATCGAAGAACTGGAAGATGGGAATCGCATATATGGGATTGTGGGAAACAAGTGTACTTGGGTGGATTTGATACGGCTCATGCTGCAGCAAGGGCATATGATCGAGCTGCAATTAAGTTCCGTGGTCTTGATGCAGATATCAATTTCAACGTCAGTGACTATGAGGAAGATATAAAGCAGATGAGTAACTTCACAAAGGAAGAATTTGTGCATATTCTGCGTCGACAGAGCACTGGGTTTTCAAGGGGAAGCTCAAAATATAGGGGAGTTACTCTGCATAAATGTGGGCGATGGGAAGCTCGTATGGGGCAGTTTCTTGGGAAAAAGTATATATATTTGGGGCTATTCGATAGCGAAATAGAGGCTGCAAGGGCATATGACAAGGCGGCTATAAAATGCAATGGGAGGGAAGCGGTCACGAACTTTGAGCCTAGCTCATACAAAGGGGAGATAATTTCTCAGACAGATAATGAAGATAGCAACCTGAATCTTGACCTCAGCTTGGCCATAGCTCCCCCTGCTAACTCCGATGGTTTCCAAGTTCAGCTTGGTTGGATGAACATGCCTGTTGATGGGAGTGTTACGCCTCAGCAATCTGCATCAAGATCACTGAAGGCTCAGCCGTCTCATGTTTTCCCAATAGCTTCTGAGCATCCTTCTTTCTGGAATGGTTCCAAATTCTTTCCTATCAGTAAGGAAAGGGCAATAGAGAAAAGAATGGAAGTTGATTCCCTGCCAAACTGGCCGTTTCAATTCCAAGCTCCTTATGGCGGGGCAAATTTGCTTCCAACCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCTACGACACCAGCTGCTGATACTCAAATTCATTTTCCAAATATGACGGTCGTACGCCCCGAGTTTTCTTCATTCATCAACCACTGA 1443 0.4754 MLDLNLNVGSSDSGSISVDMSPKKTLPQSGSQMDSSGSFDSSVVNADTSTNTCDDDSCSYGDTFAHDFGILKKSATDDGTSSKAVEIPVGQSQYGNNRTIQLFPVAGAQVANVTELGIGQRFPGSSSSKGWMDFLGKEGGDGGKPEQSMLPYQQQRPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNVSDYEEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPSSYKGEIISQTDNEDSNLNLDLSLAIAPPANSDGFQVQLGWMNMPVDGSVTPQQSASRSLKAQPSHVFPIASEHPSFWNGSKFFPISKERAIEKRMEVDSLPNWPFQFQAPYGGANLLPTFSAAASSGFPSTTPAADTQIHFPNMTVVRPEFSSFINH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0782 480 MobiDBLite consensus disorder prediction 133 173 - -
Bisa03g0782 480 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 CDD AP2 172 230 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 SUPERFAMILY DNA-binding domain 171 230 IPR016177 GO:0003677
Bisa03g0782 480 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 Pfam AP2 domain 263 313 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Bisa03g0782 480 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 PRINTS Ethylene responsive element binding protein signature 265 276 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 SUPERFAMILY DNA-binding domain 263 322 IPR016177 GO:0003677
Bisa03g0782 480 MobiDBLite consensus disorder prediction 1 43 - -
Bisa03g0782 480 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Bisa03g0782 480 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Bisa03g0782 480 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
Bisa03g0782 480 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 137 353 - -
Bisa03g0782 480 FunFam AP2-like ethylene-responsive transcription factor 263 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0782 Bisa-ChrBisa03 10426602 10429217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0782 159 346 AP2-EREBP Transcription Factor Family AT4G36920 81.152 3.06e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa03g0782 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0782 03 10426602 10429217 Bisa03g0782 03 10426602 10429217 ECH