Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0781 ATGTCTTCTTTACTCTCGCAACCTTATCAGCCTCTTCTCTATCTCTTCATCTCCAAATTGTTTTATAAATCACCTTGCTGGCAAAACCCTAGCTGCGCGATCTGGCTGTGTCACTCCCGCCTATCAGCCATGGCCGCTGCAGCTCGACCCCTGGTCACTGTCCAATCCCTTGAGGGTGACATAGCCACTGATGCAGCCCCAACCATTCCACTCCCCGATGTCATGAAGGCAGCCATTCGACCCGATATCGTCACCTTCGTTAACTCCAACATTTCCAAGAACAGTCGGCAGCCCTACGCAGTCAGCAGGCGCGCCGGTCACCAGACCTCCGCCGAATCATGGGGTACCGGTCGTGCTGTGTCTCGTATCCCCCGTGTTCCCGGCGGCGGAACCCATCGCGCCGGTCAGGGTGCTTTTGGTAATATGTGTCGTGGTGGTCGTATGTTTGCTCCCACCAAGATTTGGCGCCGATGGCATCGTAGGATCAATGTCAATCAGAAGCGGTACGCTGTCGTTTCGGCCATTGCTGCCTCGGCAATTCCATCCCTTGTTTTGGCTCGTGGTCACAGAATTGAGTCTGTGCCGGAAATGCCGCTTGTGGTGAGCGATACTGCTGAGGGTGCTGAGAAGACTAGGGATGCTATCAAAGTGCTGAAGCAGATTGGCGCTTTTCCTGACGCTGAGAAAGCAAAGGACAGCCATTCCATCCGTCCTGGTAAGGGTAAAATGAGAAATCGCCGATACATCTCTCGCAAGGGTCCTCTGATTGTGTATGGAACTGAGGGAGCCAAGGCTGTGAAAGCTTTTAGAAACATTCCTGGGGTTGAGATTGCCAATGTGGAGAGGCTGAACCTTCTTAAGTTAGCTCCTGGTGGTCATCTTGGCAGGTTTGTTATTTGGACTAAGTCTGCTTTTGAGAAGCTGGATTCAATTTATGGATCATTCGACAAGCCATCAGAGAAGAAGAAGGGGTACTTGCTTCCAAGGGCCAAGATGATCAATTCTGACTTGGCCAGGATCATCAACTCTGATGAGATTCAATCCGTTGTGAGGCCGATCAACAAGGAAGTCAAGAGGGCACCACTCAAGAAGAACCCGCTCAAGAACCTTAATGCTATGTTGAAGCTGAATCCATATGCTAAGACTGCTAAGAGGATGTCTCTTCTTGCTGAGGCTCAACGGGTTAAAGCAAAGAAAGAGAAGCTTGATAAGAAGAGGAAGTCTCTCTCTAAGGAGGAGGCTTCTGCTATTAAGGCTGCAGGAAAATCATGGTATCAAACCATGGTGTCGGACTCTGATTACACAGAATTTGAGAACTTTTCAAAGTGGTTGGGTGTTTCTCAGTGA 1347 0.4996 MSSLLSQPYQPLLYLFISKLFYKSPCWQNPSCAIWLCHSRLSAMAAAARPLVTVQSLEGDIATDAAPTIPLPDVMKAAIRPDIVTFVNSNISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRINVNQKRYAVVSAIAASAIPSLVLARGHRIESVPEMPLVVSDTAEGAEKTRDAIKVLKQIGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRAKMINSDLARIINSDEIQSVVRPINKEVKRAPLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLDKKRKSLSKEEASAIKAAGKSWYQTMVSDSDYTEFENFSKWLGVSQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0781 448 MobiDBLite consensus disorder prediction 98 116 - -
Bisa03g0781 448 Gene3D - 46 351 IPR023574 GO:0003735|GO:0005840|GO:0006412
Bisa03g0781 448 MobiDBLite consensus disorder prediction 98 137 - -
Bisa03g0781 448 FunFam 60S ribosomal protein L4 46 351 - -
Bisa03g0781 448 ProSitePatterns Ribosomal protein L1e signature. 163 189 IPR013000 -
Bisa03g0781 448 PANTHER 60S RIBOSOMAL PROTEIN L4 47 441 IPR045240 -
Bisa03g0781 448 Coils Coil 385 412 - -
Bisa03g0781 448 Pfam 60S ribosomal protein L4 C-terminal domain 323 395 IPR025755 -
Bisa03g0781 448 Pfam Ribosomal protein L4/L1 family 69 309 IPR002136 GO:0003735|GO:0005840|GO:0006412
Bisa03g0781 448 SUPERFAMILY Ribosomal protein L4 54 310 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0781 Bisa-ChrBisa03 10418954 10422230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0781 45 448 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.673 0.0 680