Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0777 ATGCCGCCTAAGCAGCAATCGAAAGCAGATTTAGCGAAGAAGCAGAAGATCGTAGAAGATAAGACCTTCGGTCTCAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAGAGCCTCAAGCAGTCCGTACAGCCCCATCCTGATGCTTCCAAAGCCGCTGCCAAGAAAAAGAAGGAGGAAGACAAGGCCAAGGAGAAGGAGCTAAATGAGTTGTTTAAAATCGCTATTACCCAGCCTAAAGTACCAGTTGGTGTTGATCCAAAGTCCATAGTATGTGAGTTTTTTAAAGCAGGGCAGTGTACCAAGGGCTTTAAATGCAAGTTCTCACACGATCTGAATGTGCAGAGGAAAGGCGAAAAGATTGACATTTACAGTGATAAGCGTGACGAGGAAACAATGGAGGACTGGGATCAAGAGACCTTGGAGAAGGTGGTGGAGTCAAAGAAAAACGAGTATAATCAGAATAAACCTACTGACATAGTCTGTAAATACTTTTTGGAAGCAGTAGAGAAGAAGCAATATGGTTGGTTTTGGGTCTGCCCCAATGGTGGTAAGAATTGCCACTATAGACATGCCCTTCCTCCTGGATATGTTTTAAAATCTCAGATGAAGGCTCTGTTAGAGGAAGAGGCTGATAAAATGCCAATTGAGGAGGAAATTGAAGATCAGCGCTCCAAATTGAAAACTACAACTCCTATGACTCCTGAGTTATTCATGCAATGGAAGAAGAAGAAGATTGAAGAAAGAGATGCCAACTTGGCTGAACAACAGGCGGAGAGAGCTAAGAACGACCGCATGAGTGGTCGTGAGCTATTTTTGTCAGATGCTAGCTTGTTTGTGGATGATGCTGAGGCATATGATAAGTACCAAAGAGAACCAGAATCTGATGATACTGAAAAGAAGGCAAATGGAAATGCTGAAGATGGTCCCAGCACCTCAACAGGTGATGCTGAGGCAGATGCAGACGCTGATGCTGAAGTTCCTGATGATGATGATGATGATGATGATGAATTAGACATGGATGAATTGAACGAATTGGAAGCAAGTTTGTCAAAGACATCAATCAAAATAAAGGAGCCAGGAGCCGAAGCGTAA 1101 0.4296 MPPKQQSKADLAKKQKIVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPHPDASKAAAKKKKEEDKAKEKELNELFKIAITQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQETLEKVVESKKNEYNQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEADKMPIEEEIEDQRSKLKTTTPMTPELFMQWKKKKIEERDANLAEQQAERAKNDRMSGRELFLSDASLFVDDAEAYDKYQREPESDDTEKKANGNAEDGPSTSTGDAEADADADAEVPDDDDDDDDELDMDELNELEASLSKTSIKIKEPGAEA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0777 366 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Bisa03g0777 366 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Bisa03g0777 366 MobiDBLite consensus disorder prediction 321 346 - -
Bisa03g0777 366 Pfam DRG Family Regulatory Proteins, Tma46 216 298 IPR032378 -
Bisa03g0777 366 Coils Coil 246 266 - -
Bisa03g0777 366 Coils Coil 51 73 - -
Bisa03g0777 366 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Bisa03g0777 366 MobiDBLite consensus disorder prediction 288 306 - -
Bisa03g0777 366 MobiDBLite consensus disorder prediction 40 64 - -
Bisa03g0777 366 Gene3D - 87 204 - -
Bisa03g0777 366 MobiDBLite consensus disorder prediction 288 366 - -
Bisa03g0777 366 Gene3D - 205 279 - -
Bisa03g0777 366 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 364 - -
Bisa03g0777 366 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Bisa03g0777 366 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0777 Bisa-ChrBisa03 10316386 10319552 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa03g0777 DFRP_C 2.2e-17 No_clan