Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0757 ATGAGCTTCCCTCTATTATGCAAAAATGGGGAATATCACAGAGTTGGTGTGGGTCCTTTCGAAAGGGTTTCGCGACTTGGAGCACGGTTCTCAATTTCTGTCAACTTCAGCTTCCGAGCAATAATGCCTCGACATGATGATAAATATGGTAATACCCGTCTCTATGTTGGTCGTTTGTCTTCGAGGACTCGTTCACGTGATCTGGATCGACTCTTTAGCAGATATGGGAGAATTCGAGATGTGGATATGAAGCATGATTTCGCCTTTGTTGAATTTAGTGATACAAGAGATGCAGATGATGCAAGATATAACCTAGATGGTCGTGAGGTGGATGGAAGTCGAATTATTGTCGAATTTGCAAAAGGGGGTCCACGTGGTTCCCGAGAATACTTGGGTAGAGGTCCTCCTCCAGGATCTGGACGCTGCTTTAACTGTGGCATTGATGGCCACTGGGCTCGTGATTGCAAAGCTGGAGACTGGAAGAACAAGTGTTACCGCTGTGGGGAGAGAGGTCATGTAGAAAGAAACTGCAAGAATAGTCCTAAGAAACTCAGTGGTCGTGGACGTAGTTATTCACGTTCACCAGTGAGGTCACGTTCTCCTCGTCGTGACAGAAGCAGGAATCGAAGTTATAGCCGAGGCCGCAGTTACAGCCGATCAAGATCCCCTGTGCGAAGGGAGCGTAGTCCTGTTCGAGAAGATAGATCAGAGTCTCCTCGTTACAGAAGTCCAGAACCCAAAAATAGTCCTCCATCCTGCAAGGGAAGAAATGATAGTCCAACGCTTGATGAAGGCAGTCCACAGAAGAGAGGATACGCATCTCCTGGGAATGATGGGCTGGCCGCCCAGCAAGATGGGTCTGACTACAGTGACGGTCCTAGAAGGAGGAGTGGAAGCCCTGTTAGCCCAATGAGGGACAGCCCCAAAATTAATGGCGGTGGCCACAGTGCTAGCCCTGGGGAGGATAGGAGCCCCATTGATGATGATTATGACACGCGCCATTCTCCAAGGGGGAGCGAGTCACCTTAA 1029 0.4917 MSFPLLCKNGEYHRVGVGPFERVSRLGARFSISVNFSFRAIMPRHDDKYGNTRLYVGRLSSRTRSRDLDRLFSRYGRIRDVDMKHDFAFVEFSDTRDADDARYNLDGREVDGSRIIVEFAKGGPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHVERNCKNSPKKLSGRGRSYSRSPVRSRSPRRDRSRNRSYSRGRSYSRSRSPVRRERSPVREDRSESPRYRSPEPKNSPPSCKGRNDSPTLDEGSPQKRGYASPGNDGLAAQQDGSDYSDGPRRRSGSPVSPMRDSPKINGGGHSASPGEDRSPIDDDYDTRHSPRGSESP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0757 342 ProSiteProfiles Zinc finger CCHC-type profile. 163 179 IPR001878 GO:0003676|GO:0008270
Bisa03g0757 342 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 122 IPR000504 GO:0003723
Bisa03g0757 342 MobiDBLite consensus disorder prediction 250 264 - -
Bisa03g0757 342 MobiDBLite consensus disorder prediction 175 342 - -
Bisa03g0757 342 MobiDBLite consensus disorder prediction 197 211 - -
Bisa03g0757 342 SMART c2hcfinal6 163 179 IPR001878 GO:0003676|GO:0008270
Bisa03g0757 342 SMART c2hcfinal6 141 157 IPR001878 GO:0003676|GO:0008270
Bisa03g0757 342 ProSiteProfiles Zinc finger CCHC-type profile. 141 156 IPR001878 GO:0003676|GO:0008270
Bisa03g0757 342 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 52 237 - -
Bisa03g0757 342 SUPERFAMILY RNA-binding domain, RBD 44 141 IPR035979 GO:0003676
Bisa03g0757 342 FunFam Serine/arginine-rich splicing factor RS2Z32 44 127 - -
Bisa03g0757 342 SUPERFAMILY Retrovirus zinc finger-like domains 132 180 IPR036875 GO:0003676|GO:0008270
Bisa03g0757 342 Gene3D - 41 130 IPR012677 -
Bisa03g0757 342 MobiDBLite consensus disorder prediction 321 342 - -
Bisa03g0757 342 Pfam Zinc knuckle 141 156 IPR001878 GO:0003676|GO:0008270
Bisa03g0757 342 Pfam Zinc knuckle 162 179 IPR001878 GO:0003676|GO:0008270
Bisa03g0757 342 FunFam serine/arginine-rich splicing factor RS2Z32-like isoform X1 132 160 - -
Bisa03g0757 342 Gene3D - 132 160 - -
Bisa03g0757 342 Gene3D - 161 207 - -
Bisa03g0757 342 MobiDBLite consensus disorder prediction 220 242 - -
Bisa03g0757 342 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 115 IPR000504 GO:0003723
Bisa03g0757 342 SMART rrm1_1 53 118 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0757 Bisa-ChrBisa03 10105767 10111375 Dispersed/Wgd