Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0732 ATGGCAGCCATGAAGAAGAGACAAAGAGAAAATGAAGCAGCAGAGAGCTTAGATTTGGCAATTTCTCTAGTGCTTCTCTCTCAACCACAAGAAAGCAAGCAGCCTCAAGAATTTGAATGCAAGACCTGCAACCGCAAGTTCTCGTCCTTCCAAGCGCTTGGAGGTCACAGAGCAAGCCACAAGAAGCCAAAACTAGATGCCCACGAAGAAGATGCAGAAGAACATAACCCCAACTTGATCAGGTTGCATAAAAAACACAGAATGCACGAGTGCTCTATTTGTGGCCAGAAATTCTCTCTGGGGCAGGCCCTGGGGGGTCACATGCGGAAACACAGAGCAGCCATGGAGGAAGGCTTACCATCTTTGAACGAGGCGGTGGCTAAAGTCCCAGTTCTGAAAAGATCCAACAGCACCAGAGTTATGTGCTTGGACTTGAACTTGACCCCTCTTGAGAATGACTTGAAGTTGCTCTTCGGAAACAGGGCACCTCAACTTAACCTTTCTTTGTATAAACTCACCGGCGAGGCGAAGCAGAGTACAGACAAGGTGAGTGGCATGGAAGCTGAGGAGGGCAAGTTCAATAGAACAGTGAGCCATTGGAAACTCACCGACGAAGCAAAGCACGGAAGGATACTCAAAGCGGGTGGCCTACTCAAGTCAGCGGTGGGAAAATACCTTTCCTTGAACAATCTCAACAAAAACAGTTCACTAACGTTGGACCATGAGAACAAGAAGGGAATTGATTCAATGACCACGCAATTGTTGGAGGAGCTCCATTCTGGACAAGAGAAGCATGGTGAAAGCATAGCAAGTATCCAAGTCCAAGCAGAAAAGAGCCTAGAAAACGATTACTCCGTATATGAATCTTCACCTTTCACTTTGCAGCACCCTTTTCATATCGTGGTTGAGCCGACAGCTAAAGCGATGAAGAGACAGAGAGAAAATGAAGCAGCAGAGAGCTTAGATCTGGCAATTTCTCTAGTGCTTCTCTCTCAACCACAAGAAAGCAAGCAGCCTCAAGAATTTGAATGCAAGACCTGCAACCGCAAGTTCTCGTCCTTCCAAGCGCTTGGAGGTCACAGAGCAAGCCACAAGAAGCCAAAACTAGATGCCCACGAAGAAGATGCAGAAGAACATAACCCCAACTTGATGATGTTACATAAAAAGCACAGAATGCACGAGTGCTCTATTTGTGGCCAGAAATTCTCTCTGGGGCAGGCCCTGGGGGGTCACATGCGGAAACACAGAGCAGCCATGGAGGAAGGCTTACCATCTTTGAACGAGGTGGTGGCTAAAGTCCCAGTTCTGAAAAGATCCAACAGCACCAGAGTTATGTGCTTGGACTTGAACTTGACCCCTCTTGAGAATGACTTGAAGTTGCTCTTCGGAAACAGGGCACCTCAACTTAATCTTTCTTTGTGTTCATGA 1428 0.4713 MAAMKKRQRENEAAESLDLAISLVLLSQPQESKQPQEFECKTCNRKFSSFQALGGHRASHKKPKLDAHEEDAEEHNPNLIRLHKKHRMHECSICGQKFSLGQALGGHMRKHRAAMEEGLPSLNEAVAKVPVLKRSNSTRVMCLDLNLTPLENDLKLLFGNRAPQLNLSLYKLTGEAKQSTDKVSGMEAEEGKFNRTVSHWKLTDEAKHGRILKAGGLLKSAVGKYLSLNNLNKNSSLTLDHENKKGIDSMTTQLLEELHSGQEKHGESIASIQVQAEKSLENDYSVYESSPFTLQHPFHIVVEPTAKAMKRQRENEAAESLDLAISLVLLSQPQESKQPQEFECKTCNRKFSSFQALGGHRASHKKPKLDAHEEDAEEHNPNLMMLHKKHRMHECSICGQKFSLGQALGGHMRKHRAAMEEGLPSLNEVVAKVPVLKRSNSTRVMCLDLNLTPLENDLKLLFGNRAPQLNLSLCS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0732 475 ProSitePatterns Zinc finger C2H2 type domain signature. 395 415 IPR013087 -
Bisa03g0732 475 SUPERFAMILY beta-beta-alpha zinc fingers 390 416 IPR036236 -
Bisa03g0732 475 ProSitePatterns Zinc finger C2H2 type domain signature. 344 364 IPR013087 -
Bisa03g0732 475 Pfam C2H2-type zinc finger 89 113 - -
Bisa03g0732 475 Pfam C2H2-type zinc finger 38 63 - -
Bisa03g0732 475 Pfam C2H2-type zinc finger 393 417 - -
Bisa03g0732 475 Pfam C2H2-type zinc finger 342 367 - -
Bisa03g0732 475 Gene3D Classic Zinc Finger 316 383 - -
Bisa03g0732 475 Gene3D Classic Zinc Finger 384 429 - -
Bisa03g0732 475 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Bisa03g0732 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 342 369 IPR013087 -
Bisa03g0732 475 SMART c2h2final6 393 415 IPR013087 -
Bisa03g0732 475 SMART c2h2final6 89 111 IPR013087 -
Bisa03g0732 475 SMART c2h2final6 342 364 IPR013087 -
Bisa03g0732 475 SMART c2h2final6 38 60 IPR013087 -
Bisa03g0732 475 MobiDBLite consensus disorder prediction 357 376 - -
Bisa03g0732 475 MobiDBLite consensus disorder prediction 59 73 - -
Bisa03g0732 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Bisa03g0732 475 PANTHER ZINC FINGER PROTEIN ZAT5 14 154 - -
Bisa03g0732 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Bisa03g0732 475 MobiDBLite consensus disorder prediction 53 73 - -
Bisa03g0732 475 Gene3D Classic Zinc Finger 22 115 - -
Bisa03g0732 475 SUPERFAMILY beta-beta-alpha zinc fingers 86 112 IPR036236 -
Bisa03g0732 475 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Bisa03g0732 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 393 420 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0732 Bisa-ChrBisa03 9784829 9796442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0732 309 473 C2H2 Transcription Factor Family AT2G37430 45.000 1.02e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0732 zf-C2H2_6 2.5e-08 CL0361