Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0730 ATGAAGAGACAGAGAGAGATTGAAGGAAGAGAGAAGTTAGATTTGGGAATTTCTCCAATGCTTCTGTGTCAGCCTCAAGAATTTGAATGCAAGACCTGTAACCGCAAGTTCTCGTCGTTCCAAGCGCTTGGAGGTCACAAAGCAAGCCACAAGAGGCCAAAGCTAGACGAACAACAACAACAACAACAAAATGGCATTTTGATGATTAAGCAGAAAATGCATGAGTGCCATGTTTGTGGTCAGAAATTCTCTGTGGGACAGGCCCTGGGGGGTCACATGAGGAAGCACAGAGCAGCTATGGACGAAAGCTTCCCCTCGATGAACCAGGTGGTAGCTAAGGTCCCAGTTCTGAAGAGATCCAATAGCACCAGATTTATGTGCTTAGACTTGAACCTGACCCCTCTTGAGAACGACTTGAAGTTGCTGTTTGGAAATAAGCCACCTCCACTCAATCTTTCTTTGTGCTCTTCGTGA 474 0.4599 MKRQREIEGREKLDLGISPMLLCQPQEFECKTCNRKFSSFQALGGHKASHKRPKLDEQQQQQQNGILMIKQKMHECHVCGQKFSVGQALGGHMRKHRAAMDESFPSMNQVVAKVPVLKRSNSTRFMCLDLNLTPLENDLKLLFGNKPPPLNLSLCSS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0730 157 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Bisa03g0730 157 Pfam C2H2-type zinc finger 74 98 - -
Bisa03g0730 157 Pfam C2H2-type zinc finger 28 53 - -
Bisa03g0730 157 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Bisa03g0730 157 Gene3D Classic Zinc Finger 26 96 - -
Bisa03g0730 157 SUPERFAMILY beta-beta-alpha zinc fingers 28 96 IPR036236 -
Bisa03g0730 157 PANTHER ZINC FINGER PROTEIN ZAT5 27 138 - -
Bisa03g0730 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Bisa03g0730 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Bisa03g0730 157 SMART c2h2final6 74 96 IPR013087 -
Bisa03g0730 157 SMART c2h2final6 28 50 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0730 Bisa-ChrBisa03 9778577 9779050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0730 28 156 C2H2 Transcription Factor Family AT3G53600 53.788 5.53e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0730 zf-C2H2_6 1e-08 CL0361