Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0729 ATGAAGAGAGAGAGAGACATGGAAGGAAGAGAGAGGTTAGACATAGCAAACTGTCTGATGCTGTTGTGTGATGCGGAAGAAAGAAAACCTTATAAGGATTCAAGCAGTATAGAATTCAAGTGCAAGACGTGCAATCGCAAGTTCTCGTCGTTTCAAGCGCTGGGAGGGCACAGGGCTAGCCACAAGCGGGCGAAGCTAGACGGAGAAGACGAGCTGAAAGCAGAGGGGAGATGTCTGAGCTTAGGGAACAAACCCAGAATGCACGAGTGCTCTATCTGTGGGGTGGAGTTCTCTCTGGGGCAAGCACTGGGTGGGCACATGAGGAAGCACAGGGCCTCTCTGCATCAAAACATGGTGGTGGGTAAAGAAGGCCCCGTTCTTAAGAGGGTGGTGTGTTTGGACCTCAACTTGACGCCTCTGGAGAATGACTTGAAGTTCTTGTTTGGGAACATGGCGCCTCCCGTTGTTGACGCCTCTGTCTGA 483 0.5135 MKRERDMEGRERLDIANCLMLLCDAEERKPYKDSSSIEFKCKTCNRKFSSFQALGGHRASHKRAKLDGEDELKAEGRCLSLGNKPRMHECSICGVEFSLGQALGGHMRKHRASLHQNMVVGKEGPVLKRVVCLDLNLTPLENDLKFLFGNMAPPVVDASV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0729 160 SMART c2h2final6 88 110 IPR013087 -
Bisa03g0729 160 SMART c2h2final6 39 61 IPR013087 -
Bisa03g0729 160 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Bisa03g0729 160 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Bisa03g0729 160 Gene3D Classic Zinc Finger 36 110 - -
Bisa03g0729 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 110 IPR013087 -
Bisa03g0729 160 Pfam C2H2-type zinc finger 88 112 - -
Bisa03g0729 160 Pfam C2H2-type zinc finger 39 63 - -
Bisa03g0729 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Bisa03g0729 160 PANTHER ZINC FINGER PROTEIN ZAT5 10 143 - -
Bisa03g0729 160 SUPERFAMILY beta-beta-alpha zinc fingers 39 110 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0729 Bisa-ChrBisa03 9765986 9766468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0729 1 157 C2H2 Transcription Factor Family AT2G37430 45.714 6.79e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0729 zf-C2H2_6 3.1e-10 CL0361