Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0716 ATGACAACTTTTCTGAAGCCTGAAAATAGCCTGAAGCGGGCTGAAGAATTAATCAATGTCGGGCAGAAGCAGGCTGCTTTGCAAACTCTACATAACCTTATCACTTCAAAAAGATACAGAGCATGGCAGAAGACAATGGAAAGAATTATGTTTAAGTATGTAGAACTGTGTGTAGACATGCGGAAGGGGCGGTTTGCAAAGGATGGGCTCATTCAGTATCGAATCATATGTCAGCAAGTAAATGTCAGTTCATTGGAGGAGGTAATCAAGCATTTCATGCATCTGTCAACTGAAAAAGCTGAGCAGGCTCGTAGCCAGGCACAAGCATTAGAAGAGGCCCTTGACGTTGATGATTTAGAGGCAGATAAAAGGCCAGAGGACTTGATGCTAAGCTATGTAAGTGGAGAGAAAGGAAAAGAAAGATCTGATCGGGAGCTTGTGACCCCATGGTTTAAATTTCTATGGGAAACCTATAGGATGGTTCTTGAGATATTACGGAACAACTCAAAATTGGAAGCCCTCTATGCTATGGCAGCACACCGGGCTTTCCAGTTTTGCAAACAATATAAGCGCACCACAGAGTTCCGCAGACTTTGTGAAATCATAAGAAACCATCTAGCCAATCTTAATAAATATCGAGATCAAAGAGACCGACCTGATCTTTCAGCTCCTGAAAGCCTGCAACTGTATCTTGACACAAGATTTGAGCAGCTGAAAATTGCTACTGAACTTGAACTCTGGCAGGAAGCCTTTCGATCCATTGAAGATATACATGGACTGATGAGCATGGTGAAGAAAACACCCAAGGCATCCTTGATGGTTGTTTACTATGTGAAGCTGACAGAAATATTTTGGATATCATCAAGCCACCTATATCATGCGTATGCATGGTTTAAGCTCTTTTTGCTACAGAAGAGTTTCAATAAAAATCTGAGCCAGAAGGATTTGCAATTGATAGCTTCTTCTGTTATTTTGGCTGCACTTTCTGTGCCTCCATATGATGACACCCGAGGTGCTTCTCATTTGGAACTGGAGCATGCAAAAGAGAGAAATTTGAGGATGGCTAATCTCATTGGTTTTAATCTTGAAAATAAACCTGAAAGCAGAGAAGGGGTAATATCTCTTTCACGATCATCCTTGCTCTCTGAACTTGTCTCCAAGGGTGTGATGTCTTGTGTTACTCAGGAAGTGAAGGACGTTTACCATCTGTTGGAACATGAATTTTTCCCCTTAGATCTTGGGTTAAAGGTTCAGCCCTTGTTAACAAAAATCTCTAAGTTAGGGGGGAAACTTGCTACTGCATCTTCTGTCCCAGAGGTGCAGTTGTCTCAGTATGTCCCAGTACTGGAAAAACTTTCTGCCTTGAGATTGTTACAGCAGGTGTCCAATGTTTACCAGACAATGAAGATTGAGACCTTGTCTGGGATGATCCCCTTTTTTGATTTTTCTGTTGTGGAGAAGATTTCTGTGGATGCTGTTAAGTATAAATTTGTTTCCATGAAAGTTGATCACATGAAAGGTGCCATTGTCTTCTCCAAGAAGGGTCTTGAGTCTGATGGCATTAGGGATCACTTGGCCATTTTTGCTGAACATTTGAATAAGGCAAGACAAATGATTCATCCTCCTGATAGGAAACCATCGAAAATCGGAGTTTTGCTTCCTACTTTGACAGATGTTGTTGCCAAGGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAGCGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGTGAGGAGGAGTCAAAGAGGTTAAGACTGCAAAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCACCGAGTATGAGCAGAGGAAGAATCAAAGGATACTTAGGGAAATAGAGGAAAGGGAAATGGAAGAAGCCCAAGCTTTGCTTCAGGAAGCTGAAAAGCGTATTAGAAAGAAGGGAAAGAAGCCAATAATAGAGGGGGATAAAATTACCAAACAAACCTTGATGGAGTTGACTTTGACTGAGCAACTGCGAGAGAGACAAGAAATGGAAAAGAAACTGCAAAAATTGGCTAAAACCATGGATTATTTGGAAAGAGCCAAAAGAGAAGAAGCTGCTCCTGTGATTGAAGCTGCATATCAAAAGCGCCTTGTGGAAGAGAGGATTCTTCATGAGCGTGAGCAACAGCAAGAGGTTGAGCTTAGCAAACAGCGGCATGAGGGAGATGTAAAGGAGAAGGAGAGGCTGGCTCGAATGATAGGCAATAAGGAGATATATCAAGAGAGAGTTGTCAGTCGTCGTCAAGCAGAGTTTAATCGATTAAGAAGTGAAAGAGAGGAGCGAATCTCTAGGATTTTGCAGTCCAGGAGACAGGAGCGAGAAAAGATGAGGAAATTGAAGTTTTATCTGAAATTGGAAGAAGAAAGACAACAAAAATTGCATGAAGAGGAGGAAGCTCGAAAGCTTGAAGAGGCTGAGAGGCGAAGGAAGGAAGAGGCTGAACGCCTAGCAAAATTGGCTGAGATAGCTGAAAAGCAGAGGCAAAGAGAAAGGGAGCTCGAAGAAAAGGAGAGGCAGAGGAGAGAAGCACTATTAGGCAGATCTACTGAAGGCTTGAAGCCTTCTGAACCTCCCCTTCCATTGGACACAGGATCTGCTGCTCCTGCAGCAGCTGCAGCAGCATCTGCCTCGGCCCCAGGGAAATATGTCCCTAAGTTCCGACGTGATAGAGCTGAAGGGACAGCTCCCCCTCCAGAAACTGATCGTTGGAGTAACACCAGCACTCCAACCAGCAGCCGGCAGGATGGTGACAGGTGGCGTAGTGATGACCGGAGACCTGCATTTATTGCTTCAAGGTCATCATCGTCTTGGTCCAAGAATCGCTGA 2877 0.4334 MTTFLKPENSLKRAEELINVGQKQAALQTLHNLITSKRYRAWQKTMERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRMVLEILRNNSKLEALYAMAAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSIEDIHGLMSMVKKTPKASLMVVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVILAALSVPPYDDTRGASHLELEHAKERNLRMANLIGFNLENKPESREGVISLSRSSLLSELVSKGVMSCVTQEVKDVYHLLEHEFFPLDLGLKVQPLLTKISKLGGKLATASSVPEVQLSQYVPVLEKLSALRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKYKFVSMKVDHMKGAIVFSKKGLESDGIRDHLAIFAEHLNKARQMIHPPDRKPSKIGVLLPTLTDVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREMEEAQALLQEAEKRIRKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPVIEAAYQKRLVEERILHEREQQQEVELSKQRHEGDVKEKERLARMIGNKEIYQERVVSRRQAEFNRLRSEREERISRILQSRRQEREKMRKLKFYLKLEEERQQKLHEEEEARKLEEAERRRKEEAERLAKLAEIAEKQRQRERELEEKERQRREALLGRSTEGLKPSEPPLPLDTGSAAPAAAAAASASAPGKYVPKFRRDRAEGTAPPPETDRWSNTSTPTSSRQDGDRWRSDDRRPAFIASRSSSSWSKNR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0716 958 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Bisa03g0716 958 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 934 IPR027512 GO:0005852
Bisa03g0716 958 ProSiteProfiles PCI domain profile. 316 516 IPR000717 -
Bisa03g0716 958 Pfam PCI domain 376 513 IPR000717 -
Bisa03g0716 958 MobiDBLite consensus disorder prediction 842 864 - -
Bisa03g0716 958 MobiDBLite consensus disorder prediction 916 931 - -
Bisa03g0716 958 Gene3D - 354 496 - -
Bisa03g0716 958 Gene3D - 268 344 - -
Bisa03g0716 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 947 IPR027512 GO:0005852
Bisa03g0716 958 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Bisa03g0716 958 Coils Coil 564 605 - -
Bisa03g0716 958 FunFam Eukaryotic translation initiation factor 3 subunit A 352 497 - -
Bisa03g0716 958 Coils Coil 670 700 - -
Bisa03g0716 958 Coils Coil 799 859 - -
Bisa03g0716 958 Coils Coil 618 652 - -
Bisa03g0716 958 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 444 535 IPR000717 -
Bisa03g0716 958 Coils Coil 93 120 - -
Bisa03g0716 958 MobiDBLite consensus disorder prediction 842 958 - -
Bisa03g0716 958 Gene3D UVR domain 217 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0716 Bisa-ChrBisa03 9509100 9514449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0716 1 949 Eukaryotic Initiation Factors Gene Family AT4G11420 70.761 0.0 1309