Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0671 ATGCTGGGAGGTTCCACTTGTTGCTCCATCTTAACGGTGTCTAAGGAAGATAATTTGGTGATGTCTTCGGAGGATTCTTCGTGTCCGGATGAGTCTGAGCTTGAATTGGGTCTTGGCTTAAGCCTTTCTCATCGTCCTGTTTCCAAGCCTTTTCATCCGCCTTCAACGGCTCACTATGCTCGTATATTAACTGCTAAAGATTTTCCTTCAATGATGGAGAATCTTGGGGTTGTAGGATGGCCTCCTCTTGGAGCATATAGAATGAATAGCTTTAATAACCACGCAAAATCACCAGCCACCGATGCTTTCAACTCTATGGTTGAGATAAGTAAGAGCAATGATACAGTGGCAAGGAAAAGTACTGATAATGGCACTGATAAAAAAAACATTAGTGCCAGAGACAAAGGCAACCTCAAGAGTTCCTGGTTTGTGAAGGTAAATATGGATGGGTTACCGATAGGACGGAAGGTTGATTTGAGTGCTCATAGTTCCTATGAAAGCTTAGCACATGCATTGGAGGAGATGTTTAATGAACACACTGTAGCTGGCACTTTTAAAAGCTTTATACTTGGAGCAGAAGGACAGTCGAATTTGCTGGATGGCTCTTCGAAATTTGTACTGACTTATGAAGACAAAGAAGGAGACTGGATGCTTGTTGGAGATGTACCTTGGGGCACCAAGGCTGGAGGAAAAGAACAGCAGACAGAAAAGTGA 714 0.4314 MLGGSTCCSILTVSKEDNLVMSSEDSSCPDESELELGLGLSLSHRPVSKPFHPPSTAHYARILTAKDFPSMMENLGVVGWPPLGAYRMNSFNNHAKSPATDAFNSMVEISKSNDTVARKSTDNGTDKKNISARDKGNLKSSWFVKVNMDGLPIGRKVDLSAHSSYESLAHALEEMFNEHTVAGTFKSFILGAEGQSNLLDGSSKFVLTYEDKEGDWMLVGDVPWGTKAGGKEQQTEK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0671 237 Gene3D - 136 229 - -
Bisa03g0671 237 Pfam AUX/IAA family 72 225 IPR033389 -
Bisa03g0671 237 ProSiteProfiles PB1 domain profile. 141 237 IPR000270 GO:0005515
Bisa03g0671 237 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 224 IPR003311 GO:0005634|GO:0006355
Bisa03g0671 237 SUPERFAMILY CAD & PB1 domains 137 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0671 Bisa-ChrBisa03 8754601 8757552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0671 81 224 B3 DNA Binding Superfamily AT3G61830 31.034 1.14e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa03g0671 AUX_IAA 1.1e-42 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0671 03 8754601 8757552 Bisa07g2032 07 48326271 48329961 CCT
Bisa03g0671 03 8754601 8757552 Bisa03g0671 03 8754601 8757552 ECH