Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0663 ATGGCACCCAATCCAAGAGTGGTAGCAGCCTATCGTGCAATGACAGTTCTTGGGATTCAAGAAGTAAAAGTGAAACCAGTATTAAAGAAACTTCTGAAATTGTATGATAAGAACTGGGAACTTATAGAAGAAGAGAACTATAGAGCTCTGGTAGATGCTATATTTGAGGAGGAGGAAAATGAGGAAGGAGAGATGGAGGATGAAGAAGCTCAGATGCAGGAGACGGTGAGACCTTTGAAGAGGCTGCGTTTACGAGGTCAAGAGAGTCAGGCTTCACATTCTCTGGCTATCTGTGGAACCAGTTCAGCTGCCTCACCATCCAAAAGGCCCAAAATAGAAGGGGACAAATTACCTAAAAGTTGTTCCAGCCAGCAGCCTCAACATGTGGCAAAATCATCTCAGTCTGATAGAAATGCAGAGACTGATGGTCACCCAGTACCAACGCAAGATAGTGTTGTTGACAAGGGAAAGCAACCTTTATCACCTCCGTCTGCTCCCCGAGGAAGAAGACCTGTACCTGAAAGAGCAGCCCCAGTAGTGCCATTTAAAGGACCAGTGGCTGAACCATCAATGAAACAGAAAAACAAAATGCCTCATAATCATGCATTAATTAAGCCCAAGGATGAGCCCATTGATGATCTGCTTCCTATTGCAATGATTCATCCTGAACCACCGAGTGGAAGAGACTCTCAAGTGAAGAATGATTCATCTAGAAAAGGAGATGGGCATGGTTCTTTGGTGTCAAAAGGCAGAGATGAAGCTAGAACTGAAGATATTCGTGATTCATCAAATGATGCAGCAAACCACAAGGTTGCAACAAACGAACAAGAACATACTTCTACCATTGAGATAGCCTCCTCATCATTAGGAGAGGTAAAACTTTATATGAGCTGCAGTTCAGCTCTTGGGAGGTCAGATTTTCGTTTGCCTAGGCGAGATCAACTTTTAAAAATGGTGGAGGATAAATGTCTGCGATCATATAAAATCACTGACCCAAATTTTTCTGTCATGAAACTGTTGAGAGATATGTGTGACTGCATGTTGGAATTCGGAACTGATTCAAATGATGACTCACAGGAAGGATCTGAAATGATGACACCAAGTCCTAATGTGTTGAGGGAATCTAAAGCATGTGATGCTCCGAGCATCAGAGACAATATAGAAGATTTGGGCATGCATTCTTGCACTTCTAATGGATCTATTGATGTTCAGTGTTCTGCTGCCTTGGTTGCATCGCTTACTTCCATTTCCTCTCCTCATCTGAGTGGTATGGACGATGCTGTACTAGTTGCCAAGAAAGTCAGAACAAATGATTTTCCAGAATGTGATGACAGAAAGGGGCTGGAGGATCCTATATCTCCAAATTCAGGCAGTTTGGTTGTTGTTCAACAGCCTCAACTTACTCCTGATGATCTACGGTCTCTTCATGGTGTTGATGACCTTTCAAAAGGAGAAGAAAATGTCAAAATTCCATGGGTAAATAAAGCTACGGCTGATTTCCCCCCACCTTTTCACTATATACACCAAAATGCTGGTTTCCGAGAGGCTCGTGTTAACTTGTATCTTTCAAACATTGGGTGTAAGGATTACTGTTCAACTTGTATTGGCAATTGTCTTTTGTCAACGACACCTTGTGCTTGTGCAAATACAATTGGGGGTGAATATGCATACACATTAGAAGGCCTAGTGAAGGAAGAGTTCTTGGAAGAGTGTATCTCCATTAGCCGGAACCCTCAACAACATCAGTTCTATTGTAATGACTGTCCACTTGAAAGAGCAAAGAATTATGATTGTTTGGAACCGTGTAAAGGACACTTAAAGAGAAAGTTTATCAAAGAATGCTGGATAAAATGTGGCTGTGTGAAGCAGTGTGGCAACCGCGTTGTCCAACGAGGAATTACATGCAACCTGCAGGTCTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGCACATTAGAGGAGCTGCCAAAAGGTGCTTTTGTGTGTGAGTTTGTTGGAGAAATATTAACCATCAAAGAGTTGCATGAAAGGAGCATGCAATGCACCAAAAATGGAAAATATATATACCCAATTCTATTAGATGCAGATTGGGATTCAGGAGTTGTGAAGGATAAAGAAGCTCTTTGCTTGGAGGCTGCATCTTATGGGAATATTGCTAGATTTATTAATCACAGGTGCTTGGATGCAAACTTGATTGAGATCCCAGTTGAAGTTGAAACCCCAGATCATCACTACTATCATCTTGCCTTCTTCGCATCCAGAAAAATAGATGCACTGGAAGAGCTCACTTGGGATTATGGCATTGACTTTGATGACCATGAGCACCCTGTCAAGCCATTCAGTTGCAGATGTGGCAGTAAGTTCTGCAGGAAGATGGAGCGGTCAAATAGATCCATTAGATCTGCGCCCATTGCATGA 2421 0.423 MAPNPRVVAAYRAMTVLGIQEVKVKPVLKKLLKLYDKNWELIEEENYRALVDAIFEEEENEEGEMEDEEAQMQETVRPLKRLRLRGQESQASHSLAICGTSSAASPSKRPKIEGDKLPKSCSSQQPQHVAKSSQSDRNAETDGHPVPTQDSVVDKGKQPLSPPSAPRGRRPVPERAAPVVPFKGPVAEPSMKQKNKMPHNHALIKPKDEPIDDLLPIAMIHPEPPSGRDSQVKNDSSRKGDGHGSLVSKGRDEARTEDIRDSSNDAANHKVATNEQEHTSTIEIASSSLGEVKLYMSCSSALGRSDFRLPRRDQLLKMVEDKCLRSYKITDPNFSVMKLLRDMCDCMLEFGTDSNDDSQEGSEMMTPSPNVLRESKACDAPSIRDNIEDLGMHSCTSNGSIDVQCSAALVASLTSISSPHLSGMDDAVLVAKKVRTNDFPECDDRKGLEDPISPNSGSLVVVQQPQLTPDDLRSLHGVDDLSKGEENVKIPWVNKATADFPPPFHYIHQNAGFREARVNLYLSNIGCKDYCSTCIGNCLLSTTPCACANTIGGEYAYTLEGLVKEEFLEECISISRNPQQHQFYCNDCPLERAKNYDCLEPCKGHLKRKFIKECWIKCGCVKQCGNRVVQRGITCNLQVFFTSEGKGWGLRTLEELPKGAFVCEFVGEILTIKELHERSMQCTKNGKYIYPILLDADWDSGVVKDKEALCLEAASYGNIARFINHRCLDANLIEIPVEVETPDHHYYHLAFFASRKIDALEELTWDYGIDFDDHEHPVKPFSCRCGSKFCRKMERSNRSIRSAPIA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0663 806 Coils Coil 51 75 - -
Bisa03g0663 806 SMART preset_2 478 619 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa03g0663 806 Gene3D SET domain 481 793 IPR046341 -
Bisa03g0663 806 MobiDBLite consensus disorder prediction 118 145 - -
Bisa03g0663 806 CDD SET_SETDB-like 502 768 - -
Bisa03g0663 806 MobiDBLite consensus disorder prediction 218 279 - -
Bisa03g0663 806 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 805 IPR025776 -
Bisa03g0663 806 MobiDBLite consensus disorder prediction 232 265 - -
Bisa03g0663 806 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 801 - -
Bisa03g0663 806 Gene3D - 1 60 IPR043017 -
Bisa03g0663 806 ProSiteProfiles SET domain profile. 635 768 IPR001214 GO:0005515
Bisa03g0663 806 SUPERFAMILY SET domain 487 792 IPR046341 -
Bisa03g0663 806 MobiDBLite consensus disorder prediction 85 206 - -
Bisa03g0663 806 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Bisa03g0663 806 Pfam SET domain 647 768 IPR001214 GO:0005515
Bisa03g0663 806 SMART set_7 635 774 IPR001214 GO:0005515
Bisa03g0663 806 Pfam Pre-SET motif 482 627 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa03g0663 806 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0663 Bisa-ChrBisa03 8607450 8614334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0663 611 793 C2H2 Transcription Factor Family AT2G23740 40.212 6.86e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa03g0663 Pre-SET 9.8e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1252 07 31795925 31801024 Bisa03g0663 03 8607450 8614334 CCT
Bisa03g0663 03 8607450 8614334 Bisa03g0663 03 8607450 8614334 ECH