Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0654 ATGACCACCTTTCAAAAGGCACCTCCTTTCCTTTTCCTTTTCCTCTTTCATGTGCTCTTACTGTTCTTTCCTCCGTTGCAGATCACTGCATCACCCACAACAGAAGCAGAAGCTCTTGTAAAATGGAAAACCAGCTTTTCTCCTCCTCTTCCTTCTTTTCTCAACTCATGGTCTCTCATCAACCTCAACAACTTTTGCAATTGGGAAGCCATTGGTTGTGATAAGACTAACACAATAGTCTCAGGGATAGATCTCTCTTATGCAAATCTCACTGGAACACTTGAAGAGTTGGATTTTGCTTCTCTTCCCAATCTCACTCTCTTCAACCTCAATAGAAACAATTTCACCGGGTCAATTCCATCTGCAATTGGTAACCTCCCCAAGCTCACTTTCTTGGACCTGGGATTAAACTCCTTTGAAGGAACACTTCCTTCTGAGCTGGGTCAGCTGAAGGAGCTTCAATATCTTAGTGTTTACTACAACAGCCTCAACAGTACCATTCCCTATCAGCTCACAAATCTTCCAAAGTTATGGTACCTAGACCTTGGAGTAAACTACTTTATATCCCCTGCTAATTGGTCACAATATTCAGGAATGTCATCTTTAACCCACCTCAGTTTGACTCTCAATTCTTTTACTTCTGAATTCCCAAGTTTCATTCTAGAGTGTCAGAACTTGACATACCTTGACATCTCCCAGAATGGTATGACTGGCTTAATACCAGAATCCATGTATACCAATCTGGGTAAGCTTGAATACCTCAATCTCACAAATTGTGGGCTAGAAGGACCTTTGTCATCAAACTTGTTCAAGCTTTCTAAACTAAAAGAACTACGACTTGGGAGTAACAAGTTTACTGGTCCTATTCCCTCAGAGTTAGGATTGATTTCTAGACTTCAATTTCTTGAATTGAATAACAACTCAATTGGAGGAGAAATTCCTTCCTCACTAGGCAAGCTCAAGGATCTAATGAGACTTGATCTCCGTCAAAATTTATTGAACTCCACAATCCCTTCTGAGCTTGGCTTCTGTACTAATCTTACCTTCCTGAGTTTAGCATTGAATAATTTGACTGGTCCTTTGCCTTTGTCATTGTCTAACCTGACCAAAATATCAAAACTGGGGATATCAGAAAATTCTTTTTCTGGTCAGATTTCTTCCTCATTGATCTCCAATTGGACTCAGTTGTTCTCCCTGCAACTTCAAAACAATGAATTCGCAGGAGAACATCCTCCAGAGATCGGCCTATTAACAAAGATCCAAACCCTATATCTATACAATAATGAGTTCTCTGGTCCCATTCCTCAGGAGATTGGAAACTTGAGAGTGATGACAGAGTTAGACCTTTCAGGAAACCAATTCTCAGGTCCAATTCCTCCAACCTTGTGGACTCTTACAAACATTACAACCATAAATCTTTTCTTCAATAAACTCTCTGGAGCCATTGCCATGGAAATTGGTAACTTGACCTCGCTCAAATTTTTTGACGTCGATAATAACTGTTTGCATGGAGAGTTGCCAGAGACCATTTCTCAGCTAACTGAGTTATGGTCATTTTCAGTGTTCTCCAATAATTTTACAGGAAATATTCCCAAGAATTTTGGGAAGTACAGTCCTTCTTTGAATCGTGTCAGCTTCTCAAACAACAACTTCTCTGGAGAACTACCACAAGATCTGTGCAGTGGTTTCAAGCTAATAAATTTGACTGTGAATAACAACGGCTTTTCTGGGCAATTGCCACAGTGCTTGAGGAATTGTTCAGAACTAGTTAGAGTTCGGCTTGATGAAAATCACTTCACTGGAAACATCACAGAAGCATTTGGAGTTCACCCCAAACTTGATTTTATCTCATTGAGTGGTAATCAGTTTGTTGGCGAGCTCTCTCCTCAGTGGGCTGAGAGTGTAAACTTGAGTAGGATTGATATGGACAGGAATAAACTTTCTGGTAGAATTCCATCTGAACTGAGTAAGTTGAGCCAATTGCGGTATTTGAGCCTGCACTCCAATGAATTGACTGGCAATATCCCACCTGAAATGGGGAATCTAAGTCAGCTGTACAAGCTGGACTTGAACAGGAACCACTTAACAGGACAGATGCCACAGAGTATTGCCAAATTGGCTCAGCTTGATTATCTTGATCTGTCAGATAACAACTTCACTGGAAACATACCAAAAGAGCTCGGTGACCAAAACCGCTTAATGAGCTTGAACTTAAGCCACAACAACTTATCTGGGGAGATACCGTCTGAGCTTGGCAATTTGTTCTCACTTCGGTATTTCTTAGACCTCAGCAGCAACTCTCTTTCAGGGCCAATTCCTCAAAACCTTAAAAAGCTCACTTCTTTGATGATTCTCAATCTCTCACACAACCATCTTGCAGGGACAATCCCTCAAACCTTTTCAAGTATGCTCAGTCTTCAATCTGTTGATTTTTCTTATAACAACTTGACGGGTTCAATCCCGACCGGAGGTATTTTCCATACAGCCCCTGCTGAAGCTTATGTTGGGAACTCTGGCTTGTGTGGGGAAGTACAAGGATTAACTGCTTGCTTCATAGTAACTACCTCAGATAAGCCCAAAGGTTTGAACAAAAAGGTTCTTCTTGGGGTTATTATACCAGTTGGTGCACTATTAATAATAGGGATGGTTGTTATAGGAATCCTAGCATTCCGTTGGCAGGCCAAACCCCTTGATGAAGAGACCAAAGATAGTGAAAAGAGTGAAAAAACTGTATCCATGGTATGGGGAAGAGATGAAAATTTGACATTTGCTGAAATTGTCAAAGCAACCAATGACTTCAATGAGAAGCACTGCATAGGAAAAGGAGGATTTGGAAGCGTGTATAGAGCAGTACTGCCAACAGAGCTCGCACAAACCATGAAGGTCACCGAGAAGTGCGATGTGTATAGCTTCGGAGTAGTGGCATTGGAGATAGTGATGGGGAAGCACCCTGGAGATCTCCTGACTTTGATGTCTTCAATGAAGCATTTGTCATCATCCATGGAGGATACAGAGGTGTTTCTGAAGGACGTGCTAGACCAGAGGCTATCACCTCCAAGGGGCCACTTAGCTGAAGCAATAGCGTTCATAGTGACAATAGGGATGGCATGCACGCGAAACTTCCCAGAGTCCAGACCCTCCATGCGTTCGGTGGCGCAAGACCTTTCGGCCACCACGCAACGTTGTCTTGCAGAGCCATTTGGGACGATAACTATAAGCAAGTTAACAGGATATCACAACTAA 3243 0.4197 MTTFQKAPPFLFLFLFHVLLLFFPPLQITASPTTEAEALVKWKTSFSPPLPSFLNSWSLINLNNFCNWEAIGCDKTNTIVSGIDLSYANLTGTLEELDFASLPNLTLFNLNRNNFTGSIPSAIGNLPKLTFLDLGLNSFEGTLPSELGQLKELQYLSVYYNSLNSTIPYQLTNLPKLWYLDLGVNYFISPANWSQYSGMSSLTHLSLTLNSFTSEFPSFILECQNLTYLDISQNGMTGLIPESMYTNLGKLEYLNLTNCGLEGPLSSNLFKLSKLKELRLGSNKFTGPIPSELGLISRLQFLELNNNSIGGEIPSSLGKLKDLMRLDLRQNLLNSTIPSELGFCTNLTFLSLALNNLTGPLPLSLSNLTKISKLGISENSFSGQISSSLISNWTQLFSLQLQNNEFAGEHPPEIGLLTKIQTLYLYNNEFSGPIPQEIGNLRVMTELDLSGNQFSGPIPPTLWTLTNITTINLFFNKLSGAIAMEIGNLTSLKFFDVDNNCLHGELPETISQLTELWSFSVFSNNFTGNIPKNFGKYSPSLNRVSFSNNNFSGELPQDLCSGFKLINLTVNNNGFSGQLPQCLRNCSELVRVRLDENHFTGNITEAFGVHPKLDFISLSGNQFVGELSPQWAESVNLSRIDMDRNKLSGRIPSELSKLSQLRYLSLHSNELTGNIPPEMGNLSQLYKLDLNRNHLTGQMPQSIAKLAQLDYLDLSDNNFTGNIPKELGDQNRLMSLNLSHNNLSGEIPSELGNLFSLRYFLDLSSNSLSGPIPQNLKKLTSLMILNLSHNHLAGTIPQTFSSMLSLQSVDFSYNNLTGSIPTGGIFHTAPAEAYVGNSGLCGEVQGLTACFIVTTSDKPKGLNKKVLLGVIIPVGALLIIGMVVIGILAFRWQAKPLDEETKDSEKSEKTVSMVWGRDENLTFAEIVKATNDFNEKHCIGKGGFGSVYRAVLPTELAQTMKVTEKCDVYSFGVVALEIVMGKHPGDLLTLMSSMKHLSSSMEDTEVFLKDVLDQRLSPPRGHLAEAIAFIVTIGMACTRNFPESRPSMRSVAQDLSATTQRCLAEPFGTITISKLTGYHN 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0654 1080 SMART LRR_typ_2 441 465 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 682 705 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 126 150 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 658 681 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 489 513 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 779 802 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 803 828 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 706 730 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 320 344 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 199 223 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 272 296 IPR003591 -
Bisa03g0654 1080 SMART LRR_typ_2 102 125 IPR003591 -
Bisa03g0654 1080 SUPERFAMILY L domain-like 392 556 - -
Bisa03g0654 1080 PANTHER LEUCINE RICH REPEAT KINASE 2 486 954 - -
Bisa03g0654 1080 SUPERFAMILY Protein kinase-like (PK-like) 913 959 IPR011009 -
Bisa03g0654 1080 SUPERFAMILY Protein kinase-like (PK-like) 955 1059 IPR011009 -
Bisa03g0654 1080 FunFam Nuclear pore complex protein NUP107 32 193 - -
Bisa03g0654 1080 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 538 853 - -
Bisa03g0654 1080 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 390 482 - -
Bisa03g0654 1080 PRINTS Leucine-rich repeat signature 226 239 - -
Bisa03g0654 1080 PRINTS Leucine-rich repeat signature 779 792 - -
Bisa03g0654 1080 Pfam Leucine rich repeat 201 261 IPR001611 GO:0005515
Bisa03g0654 1080 Pfam Leucine rich repeat 659 719 IPR001611 GO:0005515
Bisa03g0654 1080 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Bisa03g0654 1080 SUPERFAMILY RNI-like 83 407 - -
Bisa03g0654 1080 SUPERFAMILY RNI-like 522 820 - -
Bisa03g0654 1080 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Bisa03g0654 1080 Gene3D Transferase(Phosphotransferase) domain 1 921 1065 - -
Bisa03g0654 1080 FunFam MDIS1-interacting receptor like kinase 2 197 389 - -
Bisa03g0654 1080 Pfam Protein tyrosine and serine/threonine kinase 953 1055 IPR001245 GO:0004672|GO:0006468
Bisa03g0654 1080 Gene3D Ribonuclease Inhibitor 197 480 IPR032675 -
Bisa03g0654 1080 Gene3D Ribonuclease Inhibitor 481 850 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0654 Bisa-ChrBisa03 8509671 8513475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0654 248 967 Receptor kinase-like Gene Family AT4G08850 40.414 6.54e-157 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa03g0654 PK_Tyr_Ser-Thr 2.1e-06 CL0016