Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0650 ATGGTGAGTAGAATCAAAGAAGGAAGGAGAGGTGATATCAGCAGGAGTTTGCGGAAGATAATTAAATGCCTATGCTCAGGGGAGGAGTTAAGAAGAGCAGATGAAATGGTTCCTTCATCTGAATCTCTTGCAACCAAGCAATATTCAGTGAGTGAGGATTCTTGCCAAGCCGGACAAGTTAACAAGAAGAAGCCAGATACTGGTAATATTGAAGAAGCTGAATCATCTCTTCGTGAGAGTGGTTTCTTGAACTACGAGGAAGCTAGGGCACTGTTAGGAAGATATGAATTTCAGAAAGGAAACATTGAAGCTGCTTTACACGTTTTTGAGGGAATAGATATAGGTGCTGTGACTCCTAAGATCAAAATTTCCCTTTCCCAAATGATAGAACGCCCTAAGAAACATAAGAGACATTCCCAGAATTCTGCTGCACCTCCATTGTCTATACATGCTGTCGGCCTACTGTTGGAAGCAGTCCTTTTAAAAGCAAAATCATTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCCGAAGGCTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAATACAGTTGAGTTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTACCGGCGGGCATTCCTTCATCAATGGAATCTTGATGCAGGGATTACAGCAAAGATCCAGAAAGAGTTTGTCGTTTTTCTTCTATATAGTGGGGGGGAAGCAAGCCCCCCAAATCTGCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTCATTTTGATGATTTTGTTAAGAAAGGTCACTCTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTATCTGTTTCTGGGGATTTGACAACTTTGGCTAATCAATTGAAAGAATTGCTACCTAGGACCATCAGTCGAAGAGAAAGGTATTTTACTCTTGCTCTCTGTTATTACGGAGCTGGTAAGGACTTGATAGCACTGGATCTGCTCAGAAAATTGTTGAGTAGTAAAGAGGACCCAAAGCATATTCCAGGTTTGTTAATTGCGTCTAAGATATGTTGTGCTAACCCTAGTCTTGCCGAAGAAGGGGTAAACTGTGCTAACAGGGTGCTTAAGAGCTTGGATGGTAAATGTGATAAGTTAGAAAGTGTTGCCAACTGCTTTCTTGGTGTTTCACTTTCAGCACATTCGAAATTAGCCATTTCTGATGCCGAGAGGTTTGAGAGGCAATCTGAGGCACTTTGTGCCCTGGAAACTGCTGGAAGAATGACTAAAATGAGAGACCCCAATATACTATACCATCTCACTTTAGAATACGCAGAACAAAGAAAGTTGGATGGCGCACTTTATTATGCAAAATGCCTTCTACAACTAGAATGTGGGTCTAATATTAAAGGGTGGCTATTGTTAGCTCGGATATTGTCAGCTCAAAAACGATTTTTAGATGCTGAATCTATTATCAATACTGCTTTGGATCAGACTGGGAAATGGGATCAAGGAGATTTGTTGCGAACTAAAGCCAAACTTCAAATTGTGCAGGGCAAGTTAAGGAGTGCTATTGAGACATATACTCAGCTTCTTGCTGTTTTTCAAGTTCAAAATAAAACATTTGGTTCTGGAAAGAAGTTATATAAGGAGAGTAGAGATCATGCTAGGAACTTGGAAGTGGAAATATGGCACGATCTAGCTCATGTATACATAAGCCTGTCACAGTGGCGTGATGCCGAGATATGTTTTTCTAAATCTAAGGCCATCAAACTATACTCTGCTTCTAGATGTCATGCAACAGGGAAACTTCACGAAGCAAAGGGGGTTTACAAAGAGGCTCTGAAAGCTTATGGTGAAGCCTTGGCCATAGATCCAAAGCATGTGCCAAGCCTGATTTGCAGTGCAGTGGTTCTGAGAAAGTGCAGTGATGTTGATGAGTCAAACGCTGTGGCGAGAAGCTTGTTAATGGAGGCACTTCGTCGTGATAGATTGAATGGGTGTGCATGGTATAATCTTGGCCTTCTTCACAAGGCTGAGGGTACTCCATCTTCCTTAATGGAAGCTGCTGACTGTTTCGAGGCTGCTCATTTTCTTCAAGAAACTTCACCTGTTGAACCTTTCAGATGA 2217 0.4154 MVSRIKEGRRGDISRSLRKIIKCLCSGEELRRADEMVPSSESLATKQYSVSEDSCQAGQVNKKKPDTGNIEEAESSLRESGFLNYEEARALLGRYEFQKGNIEAALHVFEGIDIGAVTPKIKISLSQMIERPKKHKRHSQNSAAPPLSIHAVGLLLEAVLLKAKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNTVELLPELWKLADCPREAILSYRRAFLHQWNLDAGITAKIQKEFVVFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILILMILLRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANQLKELLPRTISRRERYFTLALCYYGAGKDLIALDLLRKLLSSKEDPKHIPGLLIASKICCANPSLAEEGVNCANRVLKSLDGKCDKLESVANCFLGVSLSAHSKLAISDAERFERQSEALCALETAGRMTKMRDPNILYHLTLEYAEQRKLDGALYYAKCLLQLECGSNIKGWLLLARILSAQKRFLDAESIINTALDQTGKWDQGDLLRTKAKLQIVQGKLRSAIETYTQLLAVFQVQNKTFGSGKKLYKESRDHARNLEVEIWHDLAHVYISLSQWRDAEICFSKSKAIKLYSASRCHATGKLHEAKGVYKEALKAYGEALAIDPKHVPSLICSAVVLRKCSDVDESNAVARSLLMEALRRDRLNGCAWYNLGLLHKAEGTPSSLMEAADCFEAAHFLQETSPVEPFR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0650 738 PANTHER PROTEIN NPG1 22 738 IPR043376 -
Bisa03g0650 738 SMART tpr_5 590 623 IPR019734 GO:0005515
Bisa03g0650 738 SMART tpr_5 498 531 IPR019734 GO:0005515
Bisa03g0650 738 SMART tpr_5 156 189 IPR019734 GO:0005515
Bisa03g0650 738 SMART tpr_5 696 732 IPR019734 GO:0005515
Bisa03g0650 738 SMART tpr_5 534 567 IPR019734 GO:0005515
Bisa03g0650 738 SMART tpr_5 341 374 IPR019734 GO:0005515
Bisa03g0650 738 SMART tpr_5 624 657 IPR019734 GO:0005515
Bisa03g0650 738 Pfam Tetratricopeptide repeat 627 657 IPR019734 GO:0005515
Bisa03g0650 738 SUPERFAMILY TPR-like 535 710 IPR011990 GO:0005515
Bisa03g0650 738 Gene3D Tetratricopeptide repeat domain 276 568 IPR011990 GO:0005515
Bisa03g0650 738 SUPERFAMILY TPR-like 342 618 IPR011990 GO:0005515
Bisa03g0650 738 Gene3D Tetratricopeptide repeat domain 569 734 IPR011990 GO:0005515
Bisa03g0650 738 ProSiteProfiles TPR repeat profile. 624 657 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0650 Bisa-ChrBisa03 8400608 8406243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0650 13 738 Calmodulin-binding Proteins AT4G28600 56.658 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g2012 07 48140788 48146402 Bisa03g0650 03 8400608 8406243 CCT
Bisa03g0650 03 8400608 8406243 Bisa03g0650 03 8400608 8406243 ECH