Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0607 ATGGGGAGAGCTCCTTGCTGCGAGAAAGTGGGACTAAAGAGAGGTCCATGGACACCAGAAGAAGACCGAATCCTCATCAATTATGTCACCAGATTTGGCCATACCAACTGGCGTGCCCTCCCCAAACAAGCTGGGCTGCTAAGGTGTGGAAAAAGTTGCAGACTCAGATGGATCAACTATTTGAAGCCTGACATCAAACGGGGCAACTTCACCCCAGAAGAAGAGGATACCATAATCAAGCTCCACGAAACGTTGGGAAACAAGTGGTCCGCAATTGCAGCGAAGTTACCGGGACGCACAGACAACGAAATAAAGAATGTGTGGCACACCCACCTGAAGAAGAGACTCCCACAATATCATCCAAAACGACAACCAAAACAAAAGGAACGACAACACCTCGTGACACACAACCCTCCACCCTCTCCTTCCCAGTGTTCAAGCGATTCCTCCACCCTCACCTCCACTCACAACAACGAACGCAACAGTACTTCTACTATTGCTACTAACGACGACGTTTCAGTAAATATTAACGTTGAGTCGCCGGCGCCGGAGAATGATCTGGCACTGGATGAGGAATTCTGGTCGGAGGTACTCTCAGCTGATAACTCCAACGAGACGACGCCGGATGTAGCCACCGTGGGTGGCGTGGAAGAACAGTTTGAGTTTCTGTTCTCTCCGCTTGACACGGCTCAAGTTGATCATGAAGTGGGTGATGTTAGTGGGTGGAGCTTGAGCGATGGGATGGATTTTTGGTACCATGTTTATTCCAGAGCTGAGGATTTCACACAGCTTCCACAACTATGA 804 0.495 MGRAPCCEKVGLKRGPWTPEEDRILINYVTRFGHTNWRALPKQAGLLRCGKSCRLRWINYLKPDIKRGNFTPEEEDTIIKLHETLGNKWSAIAAKLPGRTDNEIKNVWHTHLKKRLPQYHPKRQPKQKERQHLVTHNPPPSPSQCSSDSSTLTSTHNNERNSTSTIATNDDVSVNINVESPAPENDLALDEEFWSEVLSADNSNETTPDVATVGGVEEQFEFLFSPLDTAQVDHEVGDVSGWSLSDGMDFWYHVYSRAEDFTQLPQL 267
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0607 267 Gene3D - 14 66 - -
Bisa03g0607 267 CDD SANT 69 112 IPR001005 -
Bisa03g0607 267 FunFam MYB-related transcription factor 13 66 - -
Bisa03g0607 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa03g0607 267 Gene3D - 68 137 - -
Bisa03g0607 267 SMART sant 13 63 IPR001005 -
Bisa03g0607 267 SMART sant 66 114 IPR001005 -
Bisa03g0607 267 MobiDBLite consensus disorder prediction 113 168 - -
Bisa03g0607 267 CDD SANT 16 61 IPR001005 -
Bisa03g0607 267 FunFam Transcription factor MYB15 68 138 - -
Bisa03g0607 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa03g0607 267 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa03g0607 267 MobiDBLite consensus disorder prediction 134 168 - -
Bisa03g0607 267 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa03g0607 267 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa03g0607 267 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa03g0607 267 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa03g0607 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 206 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa03g0607 Bisa-ChrBisa03 7877431 7879006 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0607 1 267 MYB Transcription Factor Family AT2G31180 46.071 1.04e-83 249
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g0607 Myb_DNA-binding 4.3e-14 CL0123