Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0604 ATGGATGATTTCCTGTTCTTCGACGACGTCAACTCCCTTCCCTTCAACTTCAACAATTACTCGCAAGATATGATGTCTTACCATGATGCTTTAGCCAAGGAATCCTCCTCGGATTCCAATTCCTCATCTTGTCCTGGAGGATCGGAAGTGCAAGAGGTGTCCTCCGAATCCGATTTCACTCCCTCCCAAGTTAAAGAAACAAAGAATGCTGCATCATTAGCGGCGACGGAGAGCAAGAGATCAGAGAAGAGAGTGTACAGAGGAGTGAGGAGGCGGCCGTGGGGGAAATTCGCGGCGGAGATAAGGGACTCAACCAGAAATGGGGTTCGAGTGTGGATTGGAACATTCGACACAGCTGAGGCTGCAGCTTTGGCCTATGACCAAGCTGCTCTATCCACACGTGGCTCGAAGGCGGTGCTGAATTTCCCAGAGGAAATGGTGAGGGAGTCTCTGAGAGACATGGCGAGCAAGCCTTGGGAAGATGGCTCGTCCCCTGTGTTGGCGCTCAAGAAGAAGCACATCTTGAGGAACAAGTCGTCTAAGTCTGAGGCTACTCGTAAAAGCACCAAACAGGATTGTACGGATCAGTTACAAAGAAGTTGTGATCAGAATGTGTTGGTGTTGGAGGATCTGGGTGTTGAATATTTAGAGCAGCTTTTGAGCTTGACTTCGTCTCATAGTATCTGCTAG 690 0.4928 MDDFLFFDDVNSLPFNFNNYSQDMMSYHDALAKESSSDSNSSSCPGGSEVQEVSSESDFTPSQVKETKNAASLAATESKRSEKRVYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSKAVLNFPEEMVRESLRDMASKPWEDGSSPVLALKKKHILRNKSSKSEATRKSTKQDCTDQLQRSCDQNVLVLEDLGVEYLEQLLSLTSSHSIC 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0604 229 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700|GO:0006355
Bisa03g0604 229 Gene3D AP2/ERF domain 85 145 IPR036955 GO:0003700|GO:0006355
Bisa03g0604 229 SUPERFAMILY DNA-binding domain 85 144 IPR016177 GO:0003677
Bisa03g0604 229 Pfam AP2 domain 85 135 IPR001471 GO:0003700|GO:0006355
Bisa03g0604 229 MobiDBLite consensus disorder prediction 31 77 - -
Bisa03g0604 229 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Bisa03g0604 229 MobiDBLite consensus disorder prediction 32 76 - -
Bisa03g0604 229 SMART rav1_2 85 149 IPR001471 GO:0003700|GO:0006355
Bisa03g0604 229 FunFam Ethylene-responsive transcription factor 2 84 144 - -
Bisa03g0604 229 PANTHER DNA-BINDING DOMAIN 43 221 IPR044808 GO:0003700|GO:0009873
Bisa03g0604 229 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Bisa03g0604 229 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0604 Bisa-ChrBisa03 7812592 7813281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0604 73 220 AP2-EREBP Transcription Factor Family AT3G23240 58.784 1.46e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0604 AP2 5.6e-14 CL0081