Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0600 ATGTCTTCTTCAACTCCTTTTTTTCAGATCCCAGATTGGGAGTTGTGGCAGGAGCCCTCTGACATTTTCTGGGAAGCTTTTTCAAGCAACGAAGTTCATGAACACCCTTTCCATGATGATCTTTCCTTCGACATGGTGGACAGCACTAACACTACCATGGGTCCACAGCCACCAACCTTGGAGAATATTGAGACTGAAATGAAATCAGAAAGCAAAGAAGCGAAGGAGAAAGCGTACATAGGAGTGAGGAAGAGGCCATGGGGGAAATTTGCAGCGGAGATAAGAGACACGACCAGGAATGGGACTCGGGTATGGCTGGGAACGTTCGAGAGTGCAGAGGAAGCTGCTTTGGCATATGACCAGGCTGCATTCAGCATGAGAGGCCCCTCTGCTGTTCTCAACTTTCCGGTGGAGAGGGTGAAGGAGTCTCTGGAACACATCACCTATGGGTATGGCTGCCAAGAGGGGTATTCCCCTGCTTTGGCACTCAAGAAGAGGCACTGCATCCAAAGAAAATTGTTATCATCAAAGGCTAAGAAGGGCAAAGAGAAGCAGAAACCAGAAGTGGTGGTGCTGGAGGACTTGGGAGTCGAGTATCTAGAGCAACTTCTCAGCATGTCCCATCAAACTGCACCAAGCCCTAGCTAA 648 0.4907 MSSSTPFFQIPDWELWQEPSDIFWEAFSSNEVHEHPFHDDLSFDMVDSTNTTMGPQPPTLENIETEMKSESKEAKEKAYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFSMRGPSAVLNFPVERVKESLEHITYGYGCQEGYSPALALKKRHCIQRKLLSSKAKKGKEKQKPEVVVLEDLGVEYLEQLLSMSHQTAPSPS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0600 215 FunFam Ethylene-responsive transcription factor 2 77 138 - -
Bisa03g0600 215 ProSiteProfiles AP2/ERF domain profile. 78 136 IPR001471 GO:0003700|GO:0006355
Bisa03g0600 215 SMART rav1_2 78 142 IPR001471 GO:0003700|GO:0006355
Bisa03g0600 215 SUPERFAMILY DNA-binding domain 78 138 IPR016177 GO:0003677
Bisa03g0600 215 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Bisa03g0600 215 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Bisa03g0600 215 Pfam AP2 domain 79 128 IPR001471 GO:0003700|GO:0006355
Bisa03g0600 215 CDD AP2 79 137 IPR001471 GO:0003700|GO:0006355
Bisa03g0600 215 Gene3D AP2/ERF domain 77 138 IPR036955 GO:0003700|GO:0006355
Bisa03g0600 215 PANTHER DNA-BINDING DOMAIN 57 206 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0600 Bisa-ChrBisa03 7758688 7759335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0600 67 211 AP2-EREBP Transcription Factor Family AT3G23240 59.060 3.09e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0600 AP2 1.2e-14 CL0081