Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0598 ATGTCTTCTTCTCCTTTCTTTCAGATCCCAGATTGGGAGTTGTGGCAGGACCCGTCTGACATTTTCTGGGAATCTTTCTCAGGCAACGAAGTTCATGAACACCCTTTCCATGATGATCTTTCCTTCGACATGGTGGACAGCACTACCATGGGTCCACAGCCACCAACAGAAATGAAGTCAGAAAGCACAGAAGTGAAGGAGAAGGCATACATAGGAGTGAGGAAGAGGCCATGGGGGAAATTTGCAGCAGAGATAAGAGACACGACCAGGAATGGGACTCGGGTATGGCTGGGAACGTTCGAGAGTGCAGAGGAAGCTGCTTTGGCATATGACCAGGCTGCATTCAGCATGAGAGGCCCCACAGCTGTTCTCAACTTTCCGGTGGAGAGGGTGAAGGAGTCTCTGCAACACATCATGTATGGCTGCCGATGGGGGTGTTCGCCAGCTTTGGCACTCAAAAAGAGGCACTGCATCCAAAGAAAAATGTTATCAAAGGCAAAGAAGAGCAAAGAGAAGCAGAAACCAGAGGTGGTGGTGCTGGAGGACTTGGGAGTGGAGTATCTAGAGCATCTTCTCACCATGTCTCATCAAACTACAGCAAGCTCTAGCTACTTCAAATAA 621 0.4911 MSSSPFFQIPDWELWQDPSDIFWESFSGNEVHEHPFHDDLSFDMVDSTTMGPQPPTEMKSESTEVKEKAYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFSMRGPTAVLNFPVERVKESLQHIMYGCRWGCSPALALKKRHCIQRKMLSKAKKSKEKQKPEVVVLEDLGVEYLEHLLTMSHQTTASSSYFK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0598 206 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Bisa03g0598 206 FunFam Ethylene-responsive transcription factor 2 68 129 - -
Bisa03g0598 206 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Bisa03g0598 206 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
Bisa03g0598 206 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Bisa03g0598 206 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Bisa03g0598 206 PANTHER DNA-BINDING DOMAIN 56 194 IPR044808 GO:0003700|GO:0009873
Bisa03g0598 206 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
Bisa03g0598 206 Gene3D AP2/ERF domain 68 129 IPR036955 GO:0003700|GO:0006355
Bisa03g0598 206 SUPERFAMILY DNA-binding domain 69 129 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0598 Bisa-ChrBisa03 7718657 7719277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0598 58 198 AP2-EREBP Transcription Factor Family AT3G23240 60.274 2.50e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0598 AP2 1.1e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0598 03 7718657 7719277 Bisa07g1987 07 47689199 47689918 CCT
Bisa03g0598 03 7718657 7719277 Bisa03g0598 03 7718657 7719277 ECH