Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0597 ATGAAGAGAAAAGGAGATAGTGATGAGGGAAGGTACAGAGGGATTCGAAAGAGGCCGTGGGGTAAATTCGCAGCAGAGATTCGTGATCCTACTCAGAACGGGAGGCGTGTTTGGCTGGGCACATTTGACACACCAGAGGAAGCTGCAAGGGCGTATGATGCTGCTGCCTTTAGTTTCAGGGGACACAAAGCCATTCTCAACTTCCCCAATGACTCTCAACAATTTCTTCATCCTCATCATAATCTGATCTCTTTCTCATCATCCATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTATGCTGCTTCATCTTCATATAATTCCCTTGCTGCACCTGCACCTACCAGAGAGGCCTTTGTGAAAGAGGGTTTCTCAGGGCTACAGCAGGGACAGGGTTCTCCTTTGGAGCTGGAATACTTGGACAACAAGTTGTTGGAGGATCTTCTTGATCAGCCTCCACTTCATCCCAAACAGTAA 489 0.4622 MKRKGDSDEGRYRGIRKRPWGKFAAEIRDPTQNGRRVWLGTFDTPEEAARAYDAAAFSFRGHKAILNFPNDSQQFLHPHHNLISFSSSIPSSSSSSSSSFSSSYAASSSYNSLAAPAPTREAFVKEGFSGLQQGQGSPLELEYLDNKLLEDLLDQPPLHPKQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0597 162 FunFam Ethylene-responsive transcription factor 2 11 70 - -
Bisa03g0597 162 CDD AP2 11 71 IPR001471 GO:0003700|GO:0006355
Bisa03g0597 162 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Bisa03g0597 162 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700|GO:0006355
Bisa03g0597 162 ProSiteProfiles AP2/ERF domain profile. 11 69 IPR001471 GO:0003700|GO:0006355
Bisa03g0597 162 Gene3D AP2/ERF domain 10 70 IPR036955 GO:0003700|GO:0006355
Bisa03g0597 162 Pfam AP2 domain 11 62 IPR001471 GO:0003700|GO:0006355
Bisa03g0597 162 SMART rav1_2 11 75 IPR001471 GO:0003700|GO:0006355
Bisa03g0597 162 SUPERFAMILY DNA-binding domain 11 70 IPR016177 GO:0003677
Bisa03g0597 162 PANTHER DNA-BINDING DOMAIN 9 112 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0597 Bisa-ChrBisa03 7704420 7704908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0597 6 154 AP2-EREBP Transcription Factor Family AT3G23230 48.993 2.50e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0597 AP2 3.7e-16 CL0081