Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0596 ATGGATTACTTTTGTGCTCTGTCGTGGGAAGAGTTATTTTTCCTGAACCATACAGAAGATAACGACGGTGTGTTGAGCTTCAGTTCAGAAATGAGAGAGGAGGGAGTCAAGTGTTCTTGTGAAGGAGAAGCGGCGGCGGGAAAAAGAGGGAAGAGGGAGTACAGAGGAGTGAGGAGGCGGCCGTGGGGGAAGTTCGCTGCGGAGATAAGGGATTCCACCAGAAATGGGGTTCGAGTGTGGATTGGAACCTTCGACACAGCAGAGGGTGCGGCTTTGGCTTATGATCAAGCTGCTTTCTTGACACGTGGCTCCCTCGCGAAGCTCAACTTCCCAGAGCAAGTGGTGAGGGAGTCTCTCAGAGACCTTGGATGTGCGCCAGCGTGGCACCAACCTGGCTCCTCCCCTTTGTTGGAGCTCAAGAGGAGGCACACCATGAGAGTGAGAACCTCAAACTCCAAAGCCCAGGCTATCACTATAGAAAAGAGGAAAGGGGATGATTTGAACTTGAAGGGTGGGCATCAAGACGTGTTGGTGTTGGAGGACTTGGGTGCTGAATATCTTGACCAACTTCTCACCTCCACTACTCCTGCTTAG 594 0.5202 MDYFCALSWEELFFLNHTEDNDGVLSFSSEMREEGVKCSCEGEAAAGKRGKREYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEGAALAYDQAAFLTRGSLAKLNFPEQVVRESLRDLGCAPAWHQPGSSPLLELKRRHTMRVRTSNSKAQAITIEKRKGDDLNLKGGHQDVLVLEDLGAEYLDQLLTSTTPA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0596 197 ProSiteProfiles AP2/ERF domain profile. 53 111 IPR001471 GO:0003700|GO:0006355
Bisa03g0596 197 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Bisa03g0596 197 CDD AP2 54 113 IPR001471 GO:0003700|GO:0006355
Bisa03g0596 197 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Bisa03g0596 197 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Bisa03g0596 197 Gene3D AP2/ERF domain 52 113 IPR036955 GO:0003700|GO:0006355
Bisa03g0596 197 PANTHER DNA-BINDING DOMAIN 44 191 IPR044808 GO:0003700|GO:0009873
Bisa03g0596 197 SMART rav1_2 53 117 IPR001471 GO:0003700|GO:0006355
Bisa03g0596 197 FunFam Ethylene-responsive transcription factor 2 52 112 - -
Bisa03g0596 197 Pfam AP2 domain 54 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0596 Bisa-ChrBisa03 7696998 7703196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0596 13 194 AP2-EREBP Transcription Factor Family AT2G31230 45.146 1.75e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0596 AP2 4e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0596 03 7696998 7703196 Bisa03g0596 03 7696998 7703196 ECH