Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0581 ATGCATCACTGTTCTAGAATTGATGATGTTGAAGACATAGAGTCGCTTCGTTGGGAAGATCAGCAGAAGATCAGAAAATATGTAGAGAGTGTTGGGCAACTAACACCAAATACTATCAAAGATACAGAGTACAGTATTGAAGTTTCGCAAACTTCTCGTGCTACATGCAGGCACTGTGGTCAAAAAATAGTCAACGGAGAGATTCGTATTTCTAGTAAGCCTGGTGGTAAAGGTGCTAGAGCGTTAGCTTGGCACCATGCCAAGTGTCTCATGGAATTATCCCCATCAATAGAAGTTGAAAAGTTGGCTGGATGGAATAGTCTCTCGCCTTCTGATCAATTAACTGTCAATGCCATGGCTAAGAAGAGTGACATGAAGGCTCAACGGGTTAAGGAAGCCACAAGCGAGTCAACTTCCAAAGTTGGCAAAAAACGTAGGAAGGATGCCAGTGGTGATCAGAAGTCAAAAGTTGCTAAAACTGAGGGAGATGTCTCTGAGGGGAGGGTGGCATCAGTAAAAGATTCCAGTGACTCAAGGAAAGCATCTGATCTGGAGAATCGGCTGGAGGCCCAGACCAAAAAACTCTGGGCTCTGAAAGACGATCTTAAAAAGTACGTGACAACTGCTGAGTTACGTGCAATGCTGAAATTGAATGGTCAAGATTCAACAGGATCGGAACTTGATTTGCGTGACCGCTGTGCCGATGGAATGATGTTTGGAGGACTTGGTTGTTGCCCTATATGTTTTGGTTCTCTCTGTTATTCTGGAGGAATGTATCGGTGCCATGGATATTTTTCTGCATGGACCAAATGTTCCTACTCTACCCGTGAGCCAATACGTCTTAGAGAGAAATGGAAAATCCCAGAGGGAACAATCAATCAGTACCTTAGCAAGTGGTGCAAATCACAAAAGGCTGAGAAACCAGTTAGGATATTGGCAACATCTGAAAGTCAAATCATTGTTGCTTGCAAGCATCAATCGTCAAACAGTGAAAGTTTGGGAGAATTGAGAATTGCTATCTCTGGATTTCCTAAAGAGTCTATTGCGGAGTGGAAACACGAAGTTGAGGGGGTTGGTGGTATGTTTCATGATAAAATAAAGAAAGATACTAATTGCTTGGTGGTGATTGGAGCATTGGATGATCAAGTAGCTGAGATGCGGAAGGCAAAGAGGATGAAAGTACCTATAGTCAGAGAGGATTATCTGGTTGATTGTATGCAAAGAAAGAAGAAGCTTCCGTTTGATTTGTACAAAGTTGAAGCGACTAGTGAGACCTCTAGCATGGCCACCATCAAAGTGAAGGGTCGAAGTGCTGTTCATGAGGCCTCTGGCTTACAGGATTCTGGCCACATACTTGAGGAAGGGAAAAGCATATATGATGCGACTTTGAATAAGTCTGATTTATCTACTGGTGAAAACAGTTACTACATTCTCCAAATAATCCAGGAAGATGAGGGGTCAAATTGCTATGTGTTCCGGAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGAAATAAACTGGATAAGAAGTCAAAAGCAGATGCAATCTCTGAATTCAAGCGATTGTTCTTTCAGCAGACTGGAAACCCTTGGAAGGATTGGGAAGAAAAGGAGTTTCACAAGCAACCGGGAAGATTCTTCCGATTGGAAATTGATTATGGGGCGTCAAAGGGAAAAAAAAATGATGCGGAAAGTAAACTGGCCCCTCCGTTAATAGAATTGATGAAGATGCTTTTTGATGTTAAAACATACAGCGCTGCCATGATGGAATTTGAGATTGATATCTGTAAAATGCCACTTGGGAAACTGAGCAAAAGTAATATCCAAAAGGGGTTTGAAGCTTTAAGAGATTTACAGAATCTGTTAAATACTACTAATACCGATCCTTCAGTCAGAGAAAGCTTACTTATTGATGCCAGCAACCGGTTTTTCACTGTGATCCCTTCTAGTCGTCGACAATTTATTAGAGACGAGGAAGATATTAAGTCGAAGGTGAAAATGTTAGAATCCCTTCAAGACCTTGAAATAGCTTCAAGATTTGTTGATAGTGATGACTCCATTGATGATAAGTATAAGAAGCTCCATTGTGATATTTCTCCACTTCCTCATGATGGTGAAGATTATCGTCTGATTGAGAAGTTTCTCTATACTTCTCATGACTGGAGTCTTGAGCTGGAAGAAGTTTTTTCACTTGAAAGGGAAGGAGAATTTGCTAAGTATGCTCCTTACAGAGAAAAGCTTGGTAACAGAATGCTCCTATGGCATGACAATCCTAGAGCTGAAGACTTATGGTTGAGACTTCTTAGCTATTCTTGCATATTTCTGAAATCAATTACTCCAGTTACTATGATGAATTTAATCGCATGGTTGACTATTGTTGTTGCAGTGGGCTGTTCTAGGTTGACAAATTTTGTGGGCATACTTAACCAAGGACTTAGAATTGCACCTCCTGAAGCCCCATCAAGTGGCTATAATTTTGGAAAAGGGATATACTTTGCTGACCTAGTAAGTAAGAGTGCTGAGTACTGCTATACTGATAAGGAAAATCCTGTTGGTCTGATGCTTTTGAGTGAAGTTGCCCTAGGAAACATGTATGAGCTCAAGAAGACTAAGTATATGGATAAACCTCCAGAAGGAAAGCACTCTACCAAAGGACTGGGCAAGAAAATACCAAATAAATCAGGGTTTGTAGGGTGGAAGGATGATGTCATTGTTCCTTGTGGCAAACCAGTGTCAGCAAAAGTCATGACCTCTAAGAAGCTCCCGTACAACGAGTATATTGTTTATAATACTGCTCAAGTTAAGATGCGGTACTTGTTGAAGATTGAAGAAGTGCCAATGAAGGAAGAGAAGGGGAAGGTGGCGATGGGAGTGAGTGAGGATGAAGAAAGCGAGAAAGAGCAGAGCAGCAGTTCCCAGGCGGGGGTGCGGCGTTTGGCGGAAAAATTAAAGTGGAGGAAACTAAAGAGGTGA 2976 0.417 MHHCSRIDDVEDIESLRWEDQQKIRKYVESVGQLTPNTIKDTEYSIEVSQTSRATCRHCGQKIVNGEIRISSKPGGKGARALAWHHAKCLMELSPSIEVEKLAGWNSLSPSDQLTVNAMAKKSDMKAQRVKEATSESTSKVGKKRRKDASGDQKSKVAKTEGDVSEGRVASVKDSSDSRKASDLENRLEAQTKKLWALKDDLKKYVTTAELRAMLKLNGQDSTGSELDLRDRCADGMMFGGLGCCPICFGSLCYSGGMYRCHGYFSAWTKCSYSTREPIRLREKWKIPEGTINQYLSKWCKSQKAEKPVRILATSESQIIVACKHQSSNSESLGELRIAISGFPKESIAEWKHEVEGVGGMFHDKIKKDTNCLVVIGALDDQVAEMRKAKRMKVPIVREDYLVDCMQRKKKLPFDLYKVEATSETSSMATIKVKGRSAVHEASGLQDSGHILEEGKSIYDATLNKSDLSTGENSYYILQIIQEDEGSNCYVFRKWGRVGNDKIGGNKLDKKSKADAISEFKRLFFQQTGNPWKDWEEKEFHKQPGRFFRLEIDYGASKGKKNDAESKLAPPLIELMKMLFDVKTYSAAMMEFEIDICKMPLGKLSKSNIQKGFEALRDLQNLLNTTNTDPSVRESLLIDASNRFFTVIPSSRRQFIRDEEDIKSKVKMLESLQDLEIASRFVDSDDSIDDKYKKLHCDISPLPHDGEDYRLIEKFLYTSHDWSLELEEVFSLEREGEFAKYAPYREKLGNRMLLWHDNPRAEDLWLRLLSYSCIFLKSITPVTMMNLIAWLTIVVAVGCSRLTNFVGILNQGLRIAPPEAPSSGYNFGKGIYFADLVSKSAEYCYTDKENPVGLMLLSEVALGNMYELKKTKYMDKPPEGKHSTKGLGKKIPNKSGFVGWKDDVIVPCGKPVSAKVMTSKKLPYNEYIVYNTAQVKMRYLLKIEEVPMKEEKGKVAMGVSEDEESEKEQSSSSQAGVRRLAEKLKWRKLKR 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0581 991 SMART WGR_cls 459 542 IPR008893 -
Bisa03g0581 991 FunFam Poly [ADP-ribose] polymerase 558 695 - -
Bisa03g0581 991 PANTHER DNA LIGASE 43 943 - -
Bisa03g0581 991 Gene3D - 37 134 IPR036957 GO:0003677|GO:0008270
Bisa03g0581 991 ProSiteProfiles Generated from MSF file: '/work/www/psmaker/tmp/pfmake.input.483415'. 175 314 IPR047572 GO:0008270
Bisa03g0581 991 FunFam Poly [ADP-ribose] polymerase 168 240 - -
Bisa03g0581 991 FunFam Poly [ADP-ribose] polymerase 326 429 - -
Bisa03g0581 991 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 47 117 IPR001510 GO:0003677|GO:0008270
Bisa03g0581 991 Gene3D - 555 695 IPR036616 GO:0003950
Bisa03g0581 991 SMART PADR1_2 229 282 IPR012982 GO:0008270
Bisa03g0581 991 MobiDBLite consensus disorder prediction 121 184 - -
Bisa03g0581 991 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 42 132 - -
Bisa03g0581 991 Gene3D BRCT domain 324 427 IPR036420 -
Bisa03g0581 991 SMART BRCT_7 331 409 IPR001357 -
Bisa03g0581 991 PIRSF NAD_ADPRT 1 762 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Bisa03g0581 991 PIRSF NAD_ADPRT 796 946 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Bisa03g0581 991 Pfam Poly(ADP-ribose) polymerase catalytic domain 800 943 IPR012317 GO:0003950
Bisa03g0581 991 SUPERFAMILY ADP-ribosylation 697 944 - -
Bisa03g0581 991 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 565 696 IPR036616 GO:0003950
Bisa03g0581 991 ProSiteProfiles PARP catalytic domain profile. 686 952 IPR012317 GO:0003950
Bisa03g0581 991 Coils Coil 181 201 - -
Bisa03g0581 991 MobiDBLite consensus disorder prediction 952 969 - -
Bisa03g0581 991 Gene3D - 696 764 - -
Bisa03g0581 991 Gene3D - 798 946 - -
Bisa03g0581 991 SUPERFAMILY BRCT domain 331 419 IPR036420 -
Bisa03g0581 991 MobiDBLite consensus disorder prediction 952 977 - -
Bisa03g0581 991 Gene3D - 241 301 IPR038650 -
Bisa03g0581 991 CDD WGR_PARP1_like 449 554 - -
Bisa03g0581 991 ProSiteProfiles Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. 44 124 IPR001510 GO:0003677|GO:0008270
Bisa03g0581 991 MobiDBLite consensus disorder prediction 124 184 - -
Bisa03g0581 991 ProSiteProfiles PARP alpha-helical domain profile. 565 683 IPR004102 GO:0003950
Bisa03g0581 991 Gene3D - 168 240 - -
Bisa03g0581 991 SMART zf_PARP_3 47 121 IPR001510 GO:0003677|GO:0008270
Bisa03g0581 991 ProSiteProfiles BRCT domain profile. 328 419 IPR001357 -
Bisa03g0581 991 CDD parp_like 565 943 - -
Bisa03g0581 991 Pfam PADR1 (NUC008) domain 231 280 IPR012982 GO:0008270
Bisa03g0581 991 ProSiteProfiles WGR domain profile. 448 547 IPR008893 -
Bisa03g0581 991 Pfam Poly(ADP-ribose) polymerase, regulatory domain 566 689 IPR004102 GO:0003950
Bisa03g0581 991 SUPERFAMILY WGR domain-like 426 551 IPR036930 -
Bisa03g0581 991 Pfam WGR domain 459 538 IPR008893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0581 Bisa-ChrBisa03 7465098 7476711 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0581 03 7465098 7476711 Bisa07g1972 07 47446576 47447438 CCT
Bisa03g0581 03 7465098 7476711 Bisa03g0581 03 7465098 7476711 ECH