Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0575 ATGGAATTCAGATACCCAGAAGAGTCAAAGAGCTGGAGCGAAGAAACCGATGAAGGATCGGATCAAAATAACGAAGATCATAGCGGAAGTGGGAGATGCTACGAGTGTGTATTTTGCAAGAGAGGCTTCACCACTGCACAAGCTCTTGGTGGACACATGAACATTCACAGGAAAGATAGAGCCAAGACCTCCAACTCCAAGCCCAGTTTTGCTGCTTCTTCCAGTTCAACCAAGGTGGTCGATGACATCAGCTACGCAATCTCAAGCCATCCACCTCGCAATTATAACTACTACTATACTTCTCCTGAGGTAGATCAAGATACTAATTATAATAATTCCCATAATCAAATTTCATTCCCAGCAGCACCCCCACCATGTGGTAATGGTATCAGTACTGTCACGCCTTCCGAGGAGGCGTTATGCGTAGAAAATCAAAGGGATCGGAACGTGTTTGGGGGGTCAGGCAGGGGTTATTGGAGGAGGGGCTTTGGCATACGTGAAAATAATAAACACAAGGTTGAAGATCATAGCAGTGAAGAAGATGGCCTGGATTTGGAGCTTCGACTGGGTTACCATCCCTAG 582 0.4605 MEFRYPEESKSWSEETDEGSDQNNEDHSGSGRCYECVFCKRGFTTAQALGGHMNIHRKDRAKTSNSKPSFAASSSSTKVVDDISYAISSHPPRNYNYYYTSPEVDQDTNYNNSHNQISFPAAPPPCGNGISTVTPSEEALCVENQRDRNVFGGSGRGYWRRGFGIRENNKHKVEDHSSEEDGLDLELRLGYHP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0575 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Bisa03g0575 193 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Bisa03g0575 193 MobiDBLite consensus disorder prediction 1 29 - -
Bisa03g0575 193 MobiDBLite consensus disorder prediction 54 75 - -
Bisa03g0575 193 SUPERFAMILY beta-beta-alpha zinc fingers 31 61 IPR036236 -
Bisa03g0575 193 MobiDBLite consensus disorder prediction 1 25 - -
Bisa03g0575 193 PANTHER OS07G0101800 PROTEIN 7 192 - -
Bisa03g0575 193 Gene3D Classic Zinc Finger 9 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0575 Bisa-ChrBisa03 7377894 7378475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0575 3 80 C2H2 Transcription Factor Family AT3G09290 40.964 1.39e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0575 None None None