Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0570 ATGGTTGGCAGCAATGAGAGGGAGAGAGATGTGAGAGGTTTAGGTCTAGGATTTCCAAAAGATAATTTAATATTTAAATGCGATATCCTCCATATCCAAACGCCATTTTGCTCTATTCGCACCGACATTTTCTCGAATCCATCAAATATAGTTGGCATGTCTGGGGAAGGTTTTGATGGACAGGATGCAGGCTACGTGCCTGAGAACCCCAGTTTTCCACAAAATCATTCCGAAGAACATGATGCAGGTGTGATTGACAATGCTGGGTTTCCTCAACAGGAATCTGAAGAACATGATGCAGGCAATGTGGTTGAGGAATACAATCCTCCAGACAATCATTTGGATGAACTTGATGCTGGAGATTTGCGCAGAAATTCTGATTCTCCTCAAAAGCATATTGATGAACATCATGATGCAGGAGAGGTGCCTGAGAGTTTTGATTCTCTGCAGAAACAGGATCATGATGTAGACACAAAGGGAAATGAAGTTAAACGGTGGCCAGGGTGGCCCGGAGAGAATGTATTCAGGATGTTGGTTCCTGTGCAGAAGGTTGGCAGTATTATTGGCCGCAAGGGTGAATTTATTAAGAAAATTACTGAAGAGACGAAAGCTCGTATTAAAATACTTGATGGTCCTCCTGGAACCTCAGAAAGAGCTGTAATGGTTTCTGCAAAAGAGGAGCCTGATCGTGCCATACCACCTGCTGTGGATGGCTTGTTAAGGGTTCATAAACAAATTGTCAATGTTGATCGCGATCCTGCAGATAGCACGTCAGCTGCTGCACGCTCAGTAGTTACCAGACTTCTTGTAGCAGATACTCAGGCAGGAAGCTTGATTGGGAAGCAGGGGGCCACAATAAAATCCATTCAAGATACCTCCGGTTGTACCATTCGTGTCCTCGGATCAGAACACCTGCCAGTTTTCGCTCTGCGAGATGATAGTGTTGTTGAAATACAAGGAGAATCTGCTGGAGTTCACAAGGCAGTTGAGCTTATTTCAACTCATCTACGAAAGTTCTTGGTTGACCGGAGCATAGTTGGAGTATTTGAAACACAGATGCAATCTCCAGATGTTCGAGTTAACCAGAATGTGCCACCACACCAACCTTGGGGTCCTCCTCCTCAAGGGTTTCCTGCTCCTTCTGGTGGTGGACCTCCTTTTGCACCTAATCATCAGTATATGCCACCTTCACATCACTATGATAACTATTATCCACCAGCTGACCTGCCTCCTATGGAGAAGCACCTTCATCAGGGTCCACCGGCATATGGAAGGGACGCATCTATGGCATCCAGTGCGCAACCTCAACAATCTGTTGTGACCAAGGTTACACAACATATGCAAATTCCTCTGTCATATGCAGATGCTGTTATTGGAACGTCAGGTGCAAATATAAGCTACATTCGCCGTGCCAGTGGAGCAAGTATCACAATTCAGGAGACAAGGGGTGTGCCAGGAGAGATGACTGTTGAGATAAGTGGGACAGCTTCACAAATACAGACTGCCCAACAGCTGGTGCAGAATTTCATGGCTGAGGCTGCAAGCGCGGCACAGGATCACATGGGAGGATCAATTGGCCAGGGTTACAATTCATATCCTGCTAATGCTCCTGTTTATGCATCTCCACCCTCAAGCGCTGGTGGCGGCCATACAGGCCATGCACCTGCTGCAGATTATGGCCCTGTATATGGCACCAATTATGGCTATTAA 1710 0.462 MVGSNERERDVRGLGLGFPKDNLIFKCDILHIQTPFCSIRTDIFSNPSNIVGMSGEGFDGQDAGYVPENPSFPQNHSEEHDAGVIDNAGFPQQESEEHDAGNVVEEYNPPDNHLDELDAGDLRRNSDSPQKHIDEHHDAGEVPESFDSLQKQDHDVDTKGNEVKRWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGTSERAVMVSAKEEPDRAIPPAVDGLLRVHKQIVNVDRDPADSTSAAARSVVTRLLVADTQAGSLIGKQGATIKSIQDTSGCTIRVLGSEHLPVFALRDDSVVEIQGESAGVHKAVELISTHLRKFLVDRSIVGVFETQMQSPDVRVNQNVPPHQPWGPPPQGFPAPSGGGPPFAPNHQYMPPSHHYDNYYPPADLPPMEKHLHQGPPAYGRDASMASSAQPQQSVVTKVTQHMQIPLSYADAVIGTSGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQTAQQLVQNFMAEAASAAQDHMGGSIGQGYNSYPANAPVYASPPSSAGGGHTGHAPAADYGPVYGTNYGY 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0570 569 CDD KH-I_PEPPER_rpt2_like 265 337 - -
Bisa03g0570 569 MobiDBLite consensus disorder prediction 59 165 - -
Bisa03g0570 569 Gene3D K Homology domain, type 1 429 518 IPR036612 GO:0003723
Bisa03g0570 569 ProSiteProfiles Type-1 KH domain profile. 442 506 - -
Bisa03g0570 569 ProSiteProfiles Type-1 KH domain profile. 263 332 - -
Bisa03g0570 569 Pfam KH domain 266 333 IPR004088 GO:0003723
Bisa03g0570 569 Pfam KH domain 175 227 IPR004088 GO:0003723
Bisa03g0570 569 Pfam KH domain 444 507 IPR004088 GO:0003723
Bisa03g0570 569 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 260 346 IPR036612 GO:0003723
Bisa03g0570 569 Gene3D - 172 342 - -
Bisa03g0570 569 ProSiteProfiles Type-1 KH domain profile. 172 239 - -
Bisa03g0570 569 SMART kh_6 262 337 IPR004087 GO:0003676
Bisa03g0570 569 SMART kh_6 171 244 IPR004087 GO:0003676
Bisa03g0570 569 SMART kh_6 441 511 IPR004087 GO:0003676
Bisa03g0570 569 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 433 513 IPR036612 GO:0003723
Bisa03g0570 569 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 164 227 IPR036612 GO:0003723
Bisa03g0570 569 MobiDBLite consensus disorder prediction 413 434 - -
Bisa03g0570 569 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 164 531 - -
Bisa03g0570 569 CDD KH-I_PEPPER_like_rpt3 442 510 - -
Bisa03g0570 569 CDD KH-I_PEPPER_rpt1_like 172 240 - -
Bisa03g0570 569 MobiDBLite consensus disorder prediction 98 162 - -
Bisa03g0570 569 MobiDBLite consensus disorder prediction 357 400 - -
Bisa03g0570 569 MobiDBLite consensus disorder prediction 366 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0570 Bisa-ChrBisa03 7315435 7326162 Dispersed/Wgd