Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0566 ATGACGACCGAAGAGACCGTTGTAGCCGTGGAATTGGCACCAGAACCGACTGACGCTGAGCCAGTCGTGGAGGAACAGGCCACCAAGGCTGGTGGCAAGTCCAAGAAGGTTAAGGAGTCAAAACCTAAGAAGGCTGCTGCTCCTAAATCCCGGAATCCGCCTACGCATCCTCCCTATGAAGAGATGATCAAGGATGCGATTGTTTCTCTGAAGGAGAAGACTGGTTCGAGCCAGTATGCGATTGCAAAGTTTATCGAGGAGAAACACAAGCAGCTTCCGTCCAACTTCAGGAAGCTATTGCTCTTCCATTTGAAGAAGCTTGTGGCTTCTGGAAAGATTGTTAAGGTGAAGGGATCCTTCAAGCTTCCACCGACTAAGTCATCGGCACCGAAGCCATCGGGGGCAGCTTCTCCGGCGAAGAAGAAGCCCGCAGCCGCTAAGCCAAAACCGAAGCCGAAGCCGAAGCCAAAGCCCAAGGCGAAGGCAAAGGCAAAGGCAAAGGCAAAGCCGGCTCCCAAGCCTAAGGAGACGAAGACAACCAAGGCAGTAACTAAAGCGCCGCCTAAGGCTAAAGCAGCTGCTAAGCCTAAGCCTAAAGCGGCTGCCAAACCCAAAGCTGCTCCTTCTAAGCCCAAGGCTGCCGCATCGAAGCCAAAAGCCGCTGCTAAGCCGAAAGCAGCTGCTAAGCCAAAGTCCAGGGAGAGGCCTGCTAAGGCTGCAAGAACATCGACGAGGACAACTCCCGGAAGAAAAGCGCCTGCTTCTAAACCGGCGCCGAAGAAGACAGCTGCAGCCAAGAAGGCCCCTGCGAAAAGCGTCAAGCCAAAGAGTGTAAAATCACCCGCAAAGAAAGCTTCGGCGAAGAAAGGAAAGAAGTGA 879 0.5358 MTTEETVVAVELAPEPTDAEPVVEEQATKAGGKSKKVKESKPKKAAAPKSRNPPTHPPYEEMIKDAIVSLKEKTGSSQYAIAKFIEEKHKQLPSNFRKLLLFHLKKLVASGKIVKVKGSFKLPPTKSSAPKPSGAASPAKKKPAAAKPKPKPKPKPKPKAKAKAKAKAKPAPKPKETKTTKAVTKAPPKAKAAAKPKPKAAAKPKAAPSKPKAAASKPKAAAKPKAAAKPKSRERPAKAARTSTRTTPGRKAPASKPAPKKTAAAKKAPAKSVKPKSVKSPAKKASAKKGKK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0566 292 PANTHER HISTONE H1 34 267 - -
Bisa03g0566 292 MobiDBLite consensus disorder prediction 115 292 - -
Bisa03g0566 292 CDD H15 53 132 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0566 292 Pfam linker histone H1 and H5 family 56 122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0566 292 Gene3D - 50 135 IPR036388 -
Bisa03g0566 292 MobiDBLite consensus disorder prediction 1 59 - -
Bisa03g0566 292 PRINTS Histone H5 signature 141 155 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bisa03g0566 292 PRINTS Histone H5 signature 42 63 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bisa03g0566 292 PRINTS Histone H5 signature 69 86 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bisa03g0566 292 PRINTS Histone H5 signature 201 220 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bisa03g0566 292 SUPERFAMILY "Winged helix" DNA-binding domain 51 127 IPR036390 -
Bisa03g0566 292 SMART h15plus2 53 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0566 292 MobiDBLite consensus disorder prediction 277 292 - -
Bisa03g0566 292 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 55 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0566 292 MobiDBLite consensus disorder prediction 144 168 - -
Bisa03g0566 292 MobiDBLite consensus disorder prediction 29 46 - -
Bisa03g0566 292 FunFam Histone H1 50 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0566 Bisa-ChrBisa03 7253407 7254380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0566 57 132 Single Myb Histone (SMH) Gene Family AT1G72740 36.709 1.23e-08 53.1