Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0562 ATGCTCAGCGCCAATGCTATCCACAAAAACCCTAGACACCCCTTACAGGCTCACACACCACGCCGGCGCTTCGATTCTTCCCCAGTTGCAGCCATGGTGAAGGCCTTATCACTCTCAATGCGCCCTTCCCATGGACAAAGCGGCTTCGTTAGTTTCAATTGGCCAACTCTTATTACTCACCACTGTCTTCGTTTCTGGGATTTTCAGGCGGATGTTGAAGGTGATGTTGCACCAGGACAGCCAAAGAAGAGGACGTTCAAGAAGTTCAGTTTCAGAGGGGTTGATCTCGATGCGCTCCTGGACATGTCTACGGACGAGCTGGTCAAGCTTTTCCATGCTCGTGCGCGTCGAAGGTTTCAACGCGGTTTGAAACGGAAGCCTATGGCACTGATCAAGAAGTTGCGCAAGGCGAAACGAGAGGCCCCGCCCGGTGAAAAGCCAGAGCCAGTTAGGACTCACCTTCGCAACATGATCATTGTCCCCGAAATGATTGGTAGCATTATTGGGGTTTACAATGGGAAGACCTTCAATCAAGTTGAAATTAAACCAGAAATGATCAGCCACTATCTTGCTGAATTCTCAATCAGTTACAAGCCCGTTAAGCACGGAAGGCCCGGTATTGGTGCTACTCACTCCTCGCGCTTCATTCCTCTTAAATGA 660 0.5 MLSANAIHKNPRHPLQAHTPRRRFDSSPVAAMVKALSLSMRPSHGQSGFVSFNWPTLITHHCLRFWDFQADVEGDVAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMISHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0562 219 SUPERFAMILY Ribosomal protein S19 123 203 IPR023575 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 NCBIfam 30S ribosomal protein S19 86 219 IPR005713 GO:0003735|GO:0006412|GO:0015935
Bisa03g0562 219 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g0562 219 Hamap 30S ribosomal protein S19 [rpsS]. 115 208 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 PRINTS Ribosomal protein S19 family signature 152 171 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 PRINTS Ribosomal protein S19 family signature 172 184 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 PRINTS Ribosomal protein S19 family signature 184 199 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 Pfam Ribosomal protein S19 117 202 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 ProSitePatterns Ribosomal protein S19 signature. 172 196 IPR020934 GO:0003723
Bisa03g0562 219 Gene3D 30s Ribosomal Protein S19; Chain A 77 219 IPR023575 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 78 219 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa03g0562 219 FunFam 40S ribosomal protein S15 76 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0562 Bisa-ChrBisa03 7215837 7217773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0562 77 219 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 88.112 3.87e-88 255