Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0561 ATGGCCGTTGACGCGCTTCATCTTCGAAGAAACTCACTCTCCGGGCCTCCGCCGGAGCCTCCTCAGCTGCAGCCGAAGCCCATCCGACTCGGCGGCGTCGCCACCAAGGAGGCGCATTTCAGAGGTGTCCGCAAGCGGCCCTGGGGCAGATTCGCCGCCGAGATCCGCGATCCGTGGAAGAAGACGCGCAAGTGGCTCGGCACCTTCGATACCGCCGAGGAGGCGGCCAGGGCCTACGACGAGGCTGCCAGGAGCCTCCGCGGACCCAGGGCTAAGACCAACTTCGTCTACGGCCCCGTCCCCGTCGCTCCGGCGATCCCTCTGCCGGCTGCGGTGGTGGCTAATTCTAGCGGCGGCGGCGGTATTGATAGTGGTGAGATGTTGGGGAGACTCGTGGAGTGTTGGAGGCCTTCGGTCTATTACACGGCGGATGGTCCGGCGGGGGTGCCGGTGAGGCTGGAGTACAGGGGATACAAGCTGGAGAATGTGGACGGGGCGGTGAGCGAGGAGGAGAGGAAGATGCAGAAGGAGAAGAAGTCGTTGATGTTGGATCTTAATCAGCCACCGCCTCTCTTCTGA 579 0.6373 MAVDALHLRRNSLSGPPPEPPQLQPKPIRLGGVATKEAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARSLRGPRAKTNFVYGPVPVAPAIPLPAAVVANSSGGGGIDSGEMLGRLVECWRPSVYYTADGPAGVPVRLEYRGYKLENVDGAVSEEERKMQKEKKSLMLDLNQPPPLF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0561 192 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 145 - -
Bisa03g0561 192 MobiDBLite consensus disorder prediction 166 180 - -
Bisa03g0561 192 MobiDBLite consensus disorder prediction 166 192 - -
Bisa03g0561 192 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Bisa03g0561 192 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Bisa03g0561 192 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Bisa03g0561 192 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Bisa03g0561 192 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Bisa03g0561 192 Coils Coil 160 180 - -
Bisa03g0561 192 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Bisa03g0561 192 MobiDBLite consensus disorder prediction 1 28 - -
Bisa03g0561 192 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Bisa03g0561 192 CDD AP2 38 95 IPR001471 GO:0003700|GO:0006355
Bisa03g0561 192 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0561 Bisa-ChrBisa03 7190047 7190625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0561 34 95 AP2-EREBP Transcription Factor Family AT1G50640 83.871 4.05e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0561 AP2 4.4e-14 CL0081