Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0560 ATGCAGATAGTGTACTCCCGGCGCAAGTTAGCCGGGGCTGCGCAGGCCCACACGGCCAGCGCATTTTCTGGTCTGCTCGTCTTAGGTTTCTGGCTCTCTGGTCTCTGGGGATTAGGTTTGTTTTCTTCTCTTTTAGCTTTTAGACAGATAGAGGCTAACATGGAAGAGGTTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAAAGTTCTAGGCTTGTTATCTCAGCCCAATGATCAGGTTCAGTATAGGAACTTAATGGTGGAAACTGGGGAGGCTGTGGGAAAGTTCAAGAAGGTTGTTTCTCTGCTCAATAGCGGATTGGGTCATGCAAGAGTCAGGAAGCTCAAAAGACTTCAAATCCCTTTTCCCCAAAGCATCCTCTTAGACAACCCAAATTGTAGAACAAACTATCAACCAAAGAATTTGCAGTTTCCCCAAATTAGCTCTAGGGACGAGTCGATTCAGGAATTGAGAAATTCACTCTCTCTGGGAAACCCCACTTTAGAATTGAGCTCAAATGGGAAAAGTCCTCTACACCTTACCCAGCAAGGGTCTTCACAGCACTATCACTTCCTTCAGCAGCAGCAACAACAAAGGTTATTGCTACAGCATCAGCAACAGATGAAACACCAAGAAATGATGTATCGGAGGAGCAATAATGGCATAAATCTGAATTTTGATAGCTCTAGTTGTACACCAACGATGTCATCAACTAGGTCTTTTATATCTTCCTTGAGCATAGATGGAAGCGTAGCTAACATGGATGGGAGTGCCTTCCATTTAATAGGAGCCCCACACTCTTCAGATCAGAATTCATTGCAACATAAAAGAAAGTGTTCTGGCAGGGGAGATGAGGGCAGCGTCAAATGTGGGAGCAGTGCTAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAAAGATCAATTAAGGTTCCGGCTATCAGTAACAAGCTTGCAGATATACCACCTGATGATTATTCATGGAGGAAGTATGGACAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGTAGCAGCATGAGAGGTTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGATGACCCTTCGATGCTAATCGTGACCTATGAAGGCGAGCACAACCACCCTAAAATACCGACACAATCTGCAAATGCATGA 1182 0.4509 MQIVYSRRKLAGAAQAHTASAFSGLLVLGFWLSGLWGLGLFSSLLAFRQIEANMEEVEEANRAAVESCHKVLGLLSQPNDQVQYRNLMVETGEAVGKFKKVVSLLNSGLGHARVRKLKRLQIPFPQSILLDNPNCRTNYQPKNLQFPQISSRDESIQELRNSLSLGNPTLELSSNGKSPLHLTQQGSSQHYHFLQQQQQQRLLLQHQQQMKHQEMMYRRSNNGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPHSSDQNSLQHKRKCSGRGDEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLDDPSMLIVTYEGEHNHPKIPTQSANA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0560 393 Pfam WRKY DNA -binding domain 327 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0560 393 ProSiteProfiles WRKY domain profile. 320 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0560 393 Coils Coil 47 67 - -
Bisa03g0560 393 Gene3D WRKY domain 311 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g0560 393 SMART WRKY_cls 325 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0560 393 Pfam Plant zinc cluster domain 278 323 IPR018872 -
Bisa03g0560 393 FunFam WRKY transcription factor 65 309 386 - -
Bisa03g0560 393 MobiDBLite consensus disorder prediction 167 188 - -
Bisa03g0560 393 MobiDBLite consensus disorder prediction 267 286 - -
Bisa03g0560 393 SUPERFAMILY WRKY DNA-binding domain 323 385 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g0560 393 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 55 390 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0560 Bisa-ChrBisa03 7166452 7171608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0560 54 390 WRKY Transcription Factor Family AT2G30590 56.878 1.06e-131 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa03g0560 WRKY 1.5e-26 CL0274