Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0557 ATGGTTCTTTCTGGATCTCCGTTAGAACCTCAAGGTTGTAAGAAGAAAACGGCAGTTTCGAGAAGCTGGGTTTTGGTAGACCACAATGGCAAACGCACTGTGTTGGACGTGGACAAGTATGCTATCATGCGCCGGGTAGAAATTCACGCGAGAGATCTTCGAATTCTCGACCCCATCTTATCTTACCCTTCAATCATTTTAGGCCGAGAGAAAATCATTGTCCTCAATTTAGAGCACATTAAAGCTATTATCACCGCTGAGGAGGTATTGCTTAGAGACCCTTTCGATGATGATGTTATACCCATCGTTGAGGAACTGCAACGAAGGTTACCTAAAGTATCTGGTACTGGGCAAGCCCAAGGAGAAGAAGAGCCATGTGCTCAAGAAGTTGAAGGCGACAAAGAGACTGAATTTCCATTTGAATTCCGGGCATTGGAAGTTGCATTAGATGCAATTTGTAGTTTCCTGGATAGGCGCACAAGAGAATTAGAGACTTCTGCTTATCCAGCTTTAGATGAGCTGACCTCTAAGATCAGCAGTTGTAACTTGGATAGAGTCCGCAAATTGAAAAGTGCAATGACGAGATTGACAAACACAGTTCAAAAGATAAGGGATGAACTAGAAAACCTACTGAATGATGATGATGATATGGCTGACCTTTACTTATCAAGAAATTTAGCTGTTTCATCTCCTCCTGCAAGTGCCTCTGAAGGTCCCAACTGGATGCCTAGCCCTCCAATAACTTTAGGCTCAAAGATACGCAAATCAAGCAGAGCAGCAAGTATATCGACATTTCAAGGGGAGAATAATGTTGAGGAGCTTGAAATGTTACTTGAGGCTTATTTCGTGCAAATTGATGGAACATTAAATAAATTGACCACTTTGCGAGAATATATTGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAATCAACTCATTCAGCTAGAGCTCTTCATTAGTTCGGGGACTGTCTGTTTGGCCGTATATTCGTTGGCGGCTGCTATATTTGGTATGAATATTCCGTTTATTTGGAAAGAAAGGCACGGATATATGTTTAAATGGGTCACTATCTTTGGAGGAGTAGTTGGTAGCGCTTTGTTTTTGTCCATTATAATCTATGCTCGACGCAAAGATTTGTTGCATGCACTGGGTGGATACGTGGGTGAGAGGAACGAAGTGAGGGGTGAGAGAGAGCGAGGCTTGTCGGCGAAAGTGATGGCTAATCAGGTAGTCAAAGTGAGGAGGGATACGATTGCAGCATGCATGACTTGTTCACTCTGCAATAACTTGTTCAGCGAGGCCACTACTATATCTGAATGTCTTCATACGTTTTGCAGGAAGTGCATATACGACAAAATTACAGATGAGGAGATAGAATGCTGTCCTGTCTGCAATATCGATTTGGGCCCTGTTCCACTTGAGAAATTGAGGCCGGACCATAGTTTACAAGATGTAAGGGCTAAAATTTTCCCTTTGAAGAAAACAAAGGAGAAGGCACCAGAAGTTGTCACGCCGGGCCCGGTAACAGTACCAGCTAGAAGAAAGGAAAGATCACTTTCATCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGGCAACCATGACAGGTAGAAGAACCAAACCTACAAGAAAGGCTAGTGCTCTACGCTCCTCTAGTTTTTCCATCGAAAAACCCATTATAAAAGAGGAAGATTCAGCAGAAGATCCTCCAGAGAGTTCAAGCTCACCTGACACCTCCAACAAGTTTACTCAGATTACTAGACAGAGCTTGTCTCCTCTTGATGGAATCCAAACAGCACCCAATAAGGAAACAGACAATGGGGATGAACCATGGGAAGCAAAAACGGATCTTTGGAAACCTTTGAATTGTTTGGTAGAGGTTGCAAGTAGGAGTAAATCTTTCAAGTCTAACATGCAAGGAAGTGATGCTAAACTAGAACCTGTGCAAGTAAATGAGAGTGATTCTCAAGTACAAAAGTCCAAAAATAAGGACACTAGACGAAAGGCAAAAGTTGAGGATGAAAAGAATGGCACAGATCCTGTTTCGTCAGATACGGCAAAACCCAATAAGTCGCGCAGAAATCGCCGGAAAAAGGAACCTGTTTTGGGTGAATCGGTCATATCACCCCAAGCTGTGCTGGATGCAAACAGTGCAAAACCGAAACAAAGAACTGGTCCTATATGGTTCTCCCTAGTAGCTTCTGAAGATCAGGAAGGAGATGCACCACTACCCCAAATTCCTTCAAGTTATTTAAGAATAAAGGATGGAAACATGCCTGTCTCATTTATCCAGAAGTACCTAATGAAGAAATTAGATCTGGCCAGTGAAGAAGAGGTTGAGATTAAATGCATGGGACAACCGGTGGTCCCGACGTTGCAACTGAATAATTTGGTTGACTTGTGGCTGCAAACAACATCCTCATCACAGAGAATTCCAGCAGCAATTGGGTCCTCAGCAAAGGATTTTGTGATGGTCCTAACCTATGGTTGCAAGGCCCCACCCTCTTAA 2526 0.4303 MVLSGSPLEPQGCKKKTAVSRSWVLVDHNGKRTVLDVDKYAIMRRVEIHARDLRILDPILSYPSIILGREKIIVLNLEHIKAIITAEEVLLRDPFDDDVIPIVEELQRRLPKVSGTGQAQGEEEPCAQEVEGDKETEFPFEFRALEVALDAICSFLDRRTRELETSAYPALDELTSKISSCNLDRVRKLKSAMTRLTNTVQKIRDELENLLNDDDDMADLYLSRNLAVSSPPASASEGPNWMPSPPITLGSKIRKSSRAASISTFQGENNVEELEMLLEAYFVQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFISSGTVCLAVYSLAAAIFGMNIPFIWKERHGYMFKWVTIFGGVVGSALFLSIIIYARRKDLLHALGGYVGERNEVRGERERGLSAKVMANQVVKVRRDTIAACMTCSLCNNLFSEATTISECLHTFCRKCIYDKITDEEIECCPVCNIDLGPVPLEKLRPDHSLQDVRAKIFPLKKTKEKAPEVVTPGPVTVPARRKERSLSSLVVSTPRVSTQATMTGRRTKPTRKASALRSSSFSIEKPIIKEEDSAEDPPESSSSPDTSNKFTQITRQSLSPLDGIQTAPNKETDNGDEPWEAKTDLWKPLNCLVEVASRSKSFKSNMQGSDAKLEPVQVNESDSQVQKSKNKDTRRKAKVEDEKNGTDPVSSDTAKPNKSRRNRRKKEPVLGESVISPQAVLDANSAKPKQRTGPIWFSLVASEDQEGDAPLPQIPSSYLRIKDGNMPVSFIQKYLMKKLDLASEEEVEIKCMGQPVVPTLQLNNLVDLWLQTTSSSQRIPAAIGSSAKDFVMVLTYGCKAPPS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0557 841 Gene3D Magnesium transport protein CorA, transmembrane region 102 317 - -
Bisa03g0557 841 FunFam Magnesium transporter MRS2-1 11 94 - -
Bisa03g0557 841 SUPERFAMILY RING/U-box 424 494 - -
Bisa03g0557 841 MobiDBLite consensus disorder prediction 639 662 - -
Bisa03g0557 841 MobiDBLite consensus disorder prediction 663 686 - -
Bisa03g0557 841 ProSitePatterns Zinc finger RING-type signature. 445 454 IPR017907 -
Bisa03g0557 841 Coils Coil 186 213 - -
Bisa03g0557 841 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 411 837 IPR044807 GO:0004842
Bisa03g0557 841 MobiDBLite consensus disorder prediction 113 132 - -
Bisa03g0557 841 CDD Mrs2_Mfm1p-like 23 384 IPR039204 -
Bisa03g0557 841 ProSiteProfiles Zinc finger RING-type profile. 429 470 IPR001841 -
Bisa03g0557 841 MobiDBLite consensus disorder prediction 524 559 - -
Bisa03g0557 841 FunFam Magnesium transporter MRS2-5 117 317 - -
Bisa03g0557 841 MobiDBLite consensus disorder prediction 505 619 - -
Bisa03g0557 841 MobiDBLite consensus disorder prediction 577 610 - -
Bisa03g0557 841 Pfam Zinc finger, C3HC4 type (RING finger) 429 469 IPR018957 GO:0046872
Bisa03g0557 841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 413 510 IPR013083 -
Bisa03g0557 841 CDD RING-HC_PCGF 427 470 - -
Bisa03g0557 841 CDD RAWUL_DRIP_like 732 835 IPR044768 -
Bisa03g0557 841 Gene3D - 8 94 - -
Bisa03g0557 841 MobiDBLite consensus disorder prediction 639 728 - -
Bisa03g0557 841 SMART ring_2 429 469 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0557 Bisa-ChrBisa03 7137336 7149286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0557 7 360 MRS2 Gene Family AT5G64560 70.523 1.32e-149 442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0557 03 7137336 7149286 Bisa03g0557 03 7137336 7149286 ECH