Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0552 ATGGCCAGCGAGCCCAAGCACACCTTCCTTCCCTTCCCCAACATTAGTATTGCCATCAGATCATCACAGAGCCACAAATCAGTGAATGCTTTGAGAGAGAGAGAGAGAGAGAAAGTGATGGAGGTGATTGAAGCGAAGAAGGAGAAGATGGGCTATGAGGAAACAGAGCTGAGGCTGGGATTGCCCGGAGGAACTAGCGACTCGGAAGTGGTGAGGAAGAGAGGCTTCTCTGAGACTCAGACTCAGACTGATCAGACTGTGGATTTGATGCTCAATCTCTCTTCCAAATCCAACGATGCAGATCCAACCGACAACCCTAAGGAGAAGACTCTTCTGCCGTCCGATCCTGCTAAGCCTCCCGCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGAGGTCGTTCAGGAAGAACCTAAGAGGAGCACAGAAGAGCAGCGGAGGAGAAGAAAGGGAGAAAGGAGGAAGCCCTAATGGGAATGGCAATGGAAGCTTCGTGAAAGTGAGCATGGACGGAGCTCCCTACCTTCGCAAGGTAGACCTCAACATCTATACCACTTACCAACATCTCTACGATGCCTTGGCCAAAATGTTCAGTTCCTTCACTACCATAGGGAATTGTGGATCCCAAGGAATGAAGGATTTCATGAATGAGAGCAAGTTGATGAATCTGTTAAACAGCTCCGACTATGTCCCAACCTATGAAGACAAGGATGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGGACATGTTTATTGAATCCTGCAAGCGTTTGCGTATCATGAAAGGCAAGGAGGCTATTGGACTTGCGCCAAGAGCCATGGAGAAATGCAAGAACAGAAGCTAG 846 0.4965 MASEPKHTFLPFPNISIAIRSSQSHKSVNALREREREKVMEVIEAKKEKMGYEETELRLGLPGGTSDSEVVRKRGFSETQTQTDQTVDLMLNLSSKSNDADPTDNPKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNLRGAQKSSGGEEREKGGSPNGNGNGSFVKVSMDGAPYLRKVDLNIYTTYQHLYDALAKMFSSFTTIGNCGSQGMKDFMNESKLMNLLNSSDYVPTYEDKDGDWMLVGDVPWDMFIESCKRLRIMKGKEAIGLAPRAMEKCKNRS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0552 281 ProSiteProfiles PB1 domain profile. 162 263 IPR000270 GO:0005515
Bisa03g0552 281 MobiDBLite consensus disorder prediction 75 100 - -
Bisa03g0552 281 SUPERFAMILY CAD & PB1 domains 156 262 - -
Bisa03g0552 281 Pfam AUX/IAA family 54 272 IPR033389 -
Bisa03g0552 281 MobiDBLite consensus disorder prediction 54 164 - -
Bisa03g0552 281 Gene3D - 157 274 - -
Bisa03g0552 281 FunFam Auxin-responsive protein 157 273 - -
Bisa03g0552 281 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 50 268 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0552 Bisa-ChrBisa03 7034753 7036994 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0552 163 271 B3 DNA Binding Superfamily AT4G23980 32.110 9.48e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa03g0552 AUX_IAA 9.7e-80 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0552 03 7034753 7036994 Bisa03g0552 03 7034753 7036994 ECH