Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0550 ATGAAGGACACAGAGCTAAGACTGGGACTTCCTGGAAGCGAGGAGGCAGAGAAAGGATCAAGCTTTAGAAGAAATAAGAGAAGTTTTCCGGAAGAGGAGTCAATAAGCAAGAGCAGTGACGTTTCTAATGGTTCGGATGACCAACACGATAATACCTCACCTGCAAAGATACAAGTAGTGGGATGGCCACCAATCAGATCTTACAGGAAGAACAGTGTGCAACAGAAGAAGGAAATTAGAGAAGAGGATGAAGTGGGAGGGATGTACGTGAAAGTGAGCATGGATGGTGCACCTTATTTGAGGAAGATAGATCTCAAGGTTTACAACAGCTATTCGGAACTCCTCAAGGCCTTGCAGAACATGTTCAAGTGCACTTTTGGGGAATATTCAGAAAGGGAAGGGTACAGTGGATCTGAACATGCGCCTACTTATGAAGACAAGGACGGTGACTGGATGCTGGTCGGAGATGTTCCCTGGAATATGTTCATGTCATCCTGCAAGAGGCTCAGAATCATGAAAGCATCAGAGGCTAAGGGGTTGGGTTGTTTATGA 552 0.4547 MKDTELRLGLPGSEEAEKGSSFRRNKRSFPEEESISKSSDVSNGSDDQHDNTSPAKIQVVGWPPIRSYRKNSVQQKKEIREEDEVGGMYVKVSMDGAPYLRKIDLKVYNSYSELLKALQNMFKCTFGEYSEREGYSGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIMKASEAKGLGCL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0550 183 Gene3D - 81 183 - -
Bisa03g0550 183 FunFam Auxin-responsive protein 82 183 - -
Bisa03g0550 183 MobiDBLite consensus disorder prediction 1 58 - -
Bisa03g0550 183 Pfam AUX/IAA family 23 181 IPR033389 -
Bisa03g0550 183 MobiDBLite consensus disorder prediction 35 55 - -
Bisa03g0550 183 MobiDBLite consensus disorder prediction 1 34 - -
Bisa03g0550 183 SUPERFAMILY CAD & PB1 domains 84 173 - -
Bisa03g0550 183 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 178 IPR003311 GO:0005634|GO:0006355
Bisa03g0550 183 ProSiteProfiles PB1 domain profile. 87 174 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0550 Bisa-ChrBisa03 7023508 7024411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0550 90 180 B3 DNA Binding Superfamily AT2G46530 39.560 8.64e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa03g0550 AUX_IAA 2.1e-57 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0550 03 7023508 7024411 Bisa03g0550 03 7023508 7024411 ECH