Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0548 ATGGCAAATAATCCTTCCGACGCTCCCACCGACGACTTCCTCGAACAAATCCTTGGACTCCCAACTTTCGCTTCCACTGACTCCGGCTTGGCCGGTACCGCTGCTCCGCCACCGATGATGCTGCAGCTCAACTCCGGCGACGGCCCCGACCACCTCGCCGCTGTTGGCGCTGGTGGCGGGAGTGGCACCTTTCATGCACCAGTGTACCAGTTAGGCTTGAGCTTGGAGCAAGGAAAGGGAGGGTTTCTAAAGCCCGAGGAGGCTTCTGGGAGTGTGAAGCGGTTTCGCGAGGATATCGTTGATAGTAGAGCGAAGAATGTTTTTCATGGTCACCCCATGCCTACTACCATGCCTGCTGCTCCTCATCCACCAGCAATGCGTCCAAGGGTGAGGGCTAGGAGAGGACAGGCTACAGATCCACACAGTATAGCTGAACGGCTGCGCAGAGAAAGAATAGCCGAAAGAATCAGGGCTTTGCAGGATCTTGTGCCTAGTGTGAATAAGACAGATAGAGCTGCCATGCTAGATGAAATTGTGGATTATGTCAAGTTCTTGAGACTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCGCCGCTGGTAACTGACATTCCATTGTCATCTGTTGAGGAAGAGGGCAGTGAAGGTGGAAGAAATCAACCAGCTTGGGAGAAATGGTCAAATGATGGCACAGAAACACAGGTAGCCAAGCTTATGGAAGAAAACGTAGGGGCCGCCATGCAATTCCTTCAATCAAAGGCTCTTTGCATCATGCCCATCTCTCTGGCATCAGCAATATACCAGTCACAGCCACCGGACACCTCCAGTATAGTCAAGCCGGAAACTAACCCTCCTTCATAG 879 0.5245 MANNPSDAPTDDFLEQILGLPTFASTDSGLAGTAAPPPMMLQLNSGDGPDHLAAVGAGGGSGTFHAPVYQLGLSLEQGKGGFLKPEEASGSVKRFREDIVDSRAKNVFHGHPMPTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQDLVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTETQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0548 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 195 IPR036638 GO:0046983
Bisa03g0548 292 FunFam Basic helix-loop-helix transcription factor 131 193 - -
Bisa03g0548 292 MobiDBLite consensus disorder prediction 107 127 - -
Bisa03g0548 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Bisa03g0548 292 Pfam Helix-loop-helix DNA-binding domain 141 185 IPR011598 GO:0046983
Bisa03g0548 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 91 271 - -
Bisa03g0548 292 SMART finulus 142 191 IPR011598 GO:0046983
Bisa03g0548 292 Gene3D - 131 193 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0548 Bisa-ChrBisa03 7008587 7012647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0548 64 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.574 1.07e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g0548 HLH 1.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0548 03 7008587 7012647 Bisa03g0548 03 7008587 7012647 ECH