Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0530 ATGTTTCCAGCAGCCATGTCCAATTCCACTACTTCTTTGTCCGAAGAACCCACTGTCCCTTCTGCTTCAAGACTACTCCCTGACCTCCCTCCATTAAATCCTCTCCTCTCCAACACTTTTCCTCCTCAGCAGCCTCAAAAGATCAAGAAAAAGAGAAGCCTCCCGGGAAACCCAGACCCTGATGCAGAAGTGATAGCTTTGTCGCCGAAGACACTTTTGGCCACGAATAGGTTTGTGTGCGAGATCTGCAACAAGGGTTTCCAGAGAGACCAGAACCTTCAGCTTCACAGGAGAGGCCACAACCTGCCATGGAAGCTGAAGCAAAGGAACAGCAAAGAGGTGAAGAAGAGGGCGTACGTGTGCCCTGAGCCTACGTGCGTTCATCACAATCCGTCGAGGGCTCTGGGTGATCTCACGGGGATCAAGAAACACTACTGCAGAAAGCATGGAGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGATCTACGCCGTACAGTCTGATTGGAAAGCTCACTCGAAAACCTGTGGAACAAGAGAATATAGATGTGATTGTGGAACTCTCTTCTCCAGGAAGGACAGTTTCATAACCCACAGGGCATTCTGTGATGCATTGGCGGAAGAAAGTGCACGTCTCTCAGCAAAGCAATTAGGGTCGTCCACCTCCTCCTCCAACCCTCTCCTCCATTCTCTCTTCCTCAACCAACCCACCTTCCTCAATCATCCATGGGACCCTTCCCCTCAAAACCCTAACCCTACCAACCCTAACCCTCTCCTTAATAATAACATCAAGCCCCAGTCTCCTCACTTCCCCAATATCCCCTCCCTCTCCTTTCACCACAACGCTACGTCTCTCATGAACTCGCCCTTCCCCACCCTCCACGTCACCACCCAACCTTCCTCCAACGCTGCCACGTCACCCCACCTCTCTGCCACTGCACTCCTCCAGAAGGCTGCTACTGTCGGTGCCGCTTCTATCACAACTCAACACTCCGAGAGTCAGTCTCAGCCTCAGCCTCAGCACGTGACTCACCTCGGCATGCCCGAGTTTGGAGAAGTCAGTCATCTGGACTCGGTCGTGCCTGACTACATGACTGGGTTCGCGACACGGGATCTTAAGAATGACCAGCTGACAAGGGACTTTCTGGGTCTCACCGGCGGAGGGCACGGTGGAAATGGCGGCGCCGTCAACGTCAAGGATGTGCTCACCTTCACGGGGGACGTATACGAGCACCACCACCACCACTCCCTCCTCAAGTCCCGACAACCTTTCGGATTCGTTGGGACTACCACTGCCCCGGTGACATGGGGTAATTATTGA 1320 0.5326 MFPAAMSNSTTSLSEEPTVPSASRLLPDLPPLNPLLSNTFPPQQPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKRAYVCPEPTCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSAKQLGSSTSSSNPLLHSLFLNQPTFLNHPWDPSPQNPNPTNPNPLLNNNIKPQSPHFPNIPSLSFHHNATSLMNSPFPTLHVTTQPSSNAATSPHLSATALLQKAATVGAASITTQHSESQSQPQPQHVTHLGMPEFGEVSHLDSVVPDYMTGFATRDLKNDQLTRDFLGLTGGGHGGNGGAVNVKDVLTFTGDVYEHHHHHSLLKSRQPFGFVGTTTAPVTWGNY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0530 439 Gene3D Classic Zinc Finger 57 126 - -
Bisa03g0530 439 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 41 403 IPR031140 -
Bisa03g0530 439 MobiDBLite consensus disorder prediction 239 276 - -
Bisa03g0530 439 FunFam protein indeterminate-domain 12-like 57 125 - -
Bisa03g0530 439 MobiDBLite consensus disorder prediction 1 19 - -
Bisa03g0530 439 FunFam protein indeterminate-domain 5, chloroplastic-like 132 211 - -
Bisa03g0530 439 SMART c2h2final6 154 174 IPR013087 -
Bisa03g0530 439 SMART c2h2final6 119 149 IPR013087 -
Bisa03g0530 439 SMART c2h2final6 78 100 IPR013087 -
Bisa03g0530 439 Gene3D Classic Zinc Finger 147 211 - -
Bisa03g0530 439 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Bisa03g0530 439 MobiDBLite consensus disorder prediction 255 276 - -
Bisa03g0530 439 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 100 IPR013087 -
Bisa03g0530 439 MobiDBLite consensus disorder prediction 1 62 - -
Bisa03g0530 439 SUPERFAMILY beta-beta-alpha zinc fingers 77 174 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0530 Bisa-ChrBisa03 6694880 6698297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0530 26 428 IDZ Gene Family AT4G02670 51.544 4.60e-126 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0530 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0530 03 6694880 6698297 Bisa07g1417 07 36732112 36735195 CCT